RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 COPZ2Q9P299 210 aa13.83□□□□□ -0.2
TOP3B-201ENST00000357179 CCDC88CQ9P219 2028 aa13.83□□□□□ -0.2
TOP3B-201ENST00000357179 PRSS44E7EML9 344 aa13.83□□□□□ -0.2
TOP3B-201ENST00000357179 EEF1E1O43324 174 aaKnown RBP13.83□□□□□ -0.2
TOP3B-201ENST00000357179 RGS11O94810 467 aa13.83□□□□□ -0.2
TOP3B-201ENST00000357179 IFNA14P01570 189 aa13.83□□□□□ -0.2
TOP3B-201ENST00000357179 SRPRAP08240 638 aaKnown RBP13.83□□□□□ -0.2
TOP3B-201ENST00000357179 ANXA4P09525 319 aaPredicted RBP13.83□□□□□ -0.2
TOP3B-201ENST00000357179 ATP1B2P14415 290 aaPredicted RBP13.83□□□□□ -0.2
TOP3B-201ENST00000357179 UGT2B7P16662 529 aa13.83□□□□□ -0.2
TOP3B-201ENST00000357179 SRP9P49458 86 aaKnown RBP13.83□□□□□ -0.2
TOP3B-201ENST00000357179 MAP4K2Q12851 820 aa13.83□□□□□ -0.2
TOP3B-201ENST00000357179 DOC2AQ14183 400 aa13.83□□□□□ -0.2
TOP3B-201ENST00000357179 SEC23BQ15437 767 aa13.83□□□□□ -0.2
TOP3B-201ENST00000357179 ATRAIDQ6UW56 229 aa13.83□□□□□ -0.2
TOP3B-201ENST00000357179 SEZ6L2Q6UXD5 910 aa13.83□□□□□ -0.2
TOP3B-201ENST00000357179 KRT74Q7RTS7 529 aa13.83□□□□□ -0.2
TOP3B-201ENST00000357179 THOC6Q86W42 341 aaKnown RBP13.83□□□□□ -0.2
TOP3B-201ENST00000357179 CELF5Q8N6W0 485 aaKnown RBP13.83□□□□□ -0.2
TOP3B-201ENST00000357179 OR2AP1Q8NGE2 309 aa13.83□□□□□ -0.2
TOP3B-201ENST00000357179 ECHDC3Q96DC8 303 aa13.83□□□□□ -0.2
TOP3B-201ENST00000357179 MTERF1Q99551 399 aaKnown RBP13.83□□□□□ -0.2
TOP3B-201ENST00000357179 OSGEPL1Q9H4B0 414 aa13.83□□□□□ -0.2
TOP3B-201ENST00000357179 ING1Q9UK53 422 aaPredicted RBP13.83□□□□□ -0.2
TOP3B-201ENST00000357179 BACE2Q9Y5Z0 518 aa13.83□□□□□ -0.2
TOP3B-201ENST00000357179 GABRPO00591 440 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 SELENOFO60613 162 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 ZNF254O75437 659 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 ZNF821O75541 412 aaPredicted RBP13.82□□□□□ -0.2
TOP3B-201ENST00000357179 HLA-DPB1P04440 258 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 RBMS1P29558 406 aaKnown RBP13.82□□□□□ -0.2
TOP3B-201ENST00000357179 LIM2P55344 173 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 TSPAN5P62079 268 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 DHODHQ02127 395 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 PTSQ03393 145 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 FAM198BQ6UWH4 519 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 Q6ZNB5 142 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 PRICKLE2Q7Z3G6 844 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 HSD17B13Q7Z5P4 300 aaPredicted RBP13.82□□□□□ -0.2
TOP3B-201ENST00000357179 ZNF485Q8NCK3 441 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 FGF11Q92914 225 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 YIPF5Q969M3 257 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 LRR1Q96L50 414 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 DPH7Q9BTV6 452 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 POLR2J3Q9H1A7 115 aaKnown RBP13.82□□□□□ -0.2
TOP3B-201ENST00000357179 METTL17Q9H7H0 456 aaPredicted RBP13.82□□□□□ -0.2
TOP3B-201ENST00000357179 POLMQ9NP87 494 aaPredicted RBP13.82□□□□□ -0.2
TOP3B-201ENST00000357179 SEMA3GQ9NS98 782 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 CXorf51AA0A1B0GTR3 108 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 TCRBV16S1A1N1A0A5B0 115 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 MGAT4DA6NG13 374 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 HNRNPCL2B2RXH8 293 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 AIPO00170 330 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 PDCD5O14737 125 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 SSNA1O43805 119 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 GREM1O60565 184 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 GIFP27352 417 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 OR1D2P34982 312 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 PITPNBP48739 271 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 SELENOPP49908 381 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 PCBP3P57721 371 aaKnown RBP13.82□□□□□ -0.2
TOP3B-201ENST00000357179 CDK6Q00534 326 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 RAB40BQ12829 278 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 LYPD4Q6UWN0 246 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 OAFQ86UD1 273 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 IQCF1Q8N6M8 205 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 BEST4Q8NFU0 473 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 MOSPD2Q8NHP6 518 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 ADAMTS19Q8TE59 1207 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 PKP4Q99569 1192 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 C1GALT1Q9NS00 363 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 CBLCQ9ULV8 474 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 NINQ8N4C6 2090 aa13.82□□□□□ -0.2
TOP3B-201ENST00000357179 E7EQ34 232 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 PLATP00750 562 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 GPR135Q8IZ08 494 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 ZNF687Q8N1G0 1237 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 EIF4E3Q8N5X7 224 aaKnown RBP13.81□□□□□ -0.2
TOP3B-201ENST00000357179 OR8K3Q8NH51 312 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 CACNG6Q9BXT2 260 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 SAP130Q9H0E3 1048 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 C11orf49Q9H6J7 331 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 SPATA2Q9UM82 520 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 F8W036 122 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 OR10H3O60404 316 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 APOL3O95236 402 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 H2AFB2P0C5Z0 115 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 LIMS3P0CW19 117 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 LIMS4P0CW20 117 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 ACP2P11117 423 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 ELAVL4P26378 380 aaKnown RBP13.81□□□□□ -0.2
TOP3B-201ENST00000357179 TIA1P31483 386 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■■□□□ 12.3
TOP3B-201ENST00000357179 SOX18P35713 384 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 CD79BP40259 229 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 RPL35P42766 123 aaKnown RBP13.81□□□□□ -0.2
TOP3B-201ENST00000357179 GATMP50440 423 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 BLVRAP53004 296 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 PNLIPRP1P54315 467 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 PLD1Q13393 1074 aa13.81□□□□□ -0.2
TOP3B-201ENST00000357179 DDX39BQ13838 428 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms