RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Scara5Q8K299 491 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Moxd1Q9CXI3 613 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Fam13cQ9DBR2 601 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Jph3Q9ET77 744 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 PtgfrnQ9WV91 879 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Zfp395E9Q5N9 508 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Rab8bP61028 207 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Msto1Q2YDW2 556 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Igfbp7Q61581 281 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 FukQ7TMC8 1090 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 TbceQ8CIV8 524 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Sirt5Q8K2C6 310 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr353Q8VGK0 311 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tmed9Q99KF1 235 aaKnown RBP14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Aldh7a1Q9DBF1 539 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 AgtrapQ9WVK0 161 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr1366A0A1W2P740 328 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Slc22a1O08966 556 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 ChadO55226 358 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 F2rl3O88634 396 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Zfp41Q02526 198 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 A1bgQ19LI2 512 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Pdp1Q3UV70 538 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Clcn4Q61418 747 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr871Q7TRF0 311 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Aifm2Q8BUE4 373 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Lancl3Q8CD19 420 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Trmt6Q8CE96 497 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Cnppd1Q8K158 407 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 PpcsQ8VDG5 311 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr692Q8VF03 329 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr854Q8VFF1 315 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Socs7Q8VHQ2 579 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Lypd3Q91YK8 363 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gnpda2Q9CRC9 276 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 HnrnpfQ9Z2X1 415 aaKnown RBP14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Scn9aQ62205 1984 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Aldh3b2E9Q3E1 479 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Esp34G3UXG0 151 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 P01644 108 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 P01645 108 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 P01646 108 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 P01647 108 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 P01807 119 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Col19a1Q0VF58 1136 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ostf1Q62422 215 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tas2r110Q7M712 333 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr320Q7TRZ4 306 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Zc3h14Q8BJ05 735 aaKnown RBP14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr164Q8VF87 315 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Usb1Q91W78 267 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Oosp1Q925U0 202 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Pop7Q9DCH2 140 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Asb3Q9WV72 525 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gm13285B1AYI3 182 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gm13275B1AYI8 182 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gm20431E9PY39 371 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ctla2bP12400 113 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Acvr2aP27038 513 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Acvr1P37172 509 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 InhbcP55104 352 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Fgf13P70377 245 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tgfbr2Q62312 592 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr503Q7TRU8 323 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Slc36a2Q8BHK3 478 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 IfnzQ8BQT1 182 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gpr26Q8BZA7 337 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gm13278Q8CD73 182 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Crlf2Q8CII9 359 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Mchr1Q8JZL2 353 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 TapbplQ8VD31 451 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr818Q8VG46 318 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Cwh43Q91YL7 699 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Zfp810Q99K45 461 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 D10Wsu102eQ9CX66 185 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Fank1Q9DAM9 344 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 GhrlQ9EQX0 117 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr316A0A0N4SVP2 306 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ttc39aA2ACP1 578 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gm5571P01639 130 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ubl4aP21126 157 aaKnown RBP14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 CtnsP57757 367 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Rpl19P84099 196 aaKnown RBP14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 InhaQ04997 366 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr318Q5NCD7 306 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gpr75Q6X632 540 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Prr14Q7TPN9 612 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr845Q7TRG2 312 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Znf592Q8BHZ4 1262 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Kyat1Q8BTY1 424 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr1461Q8VEV7 312 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Mfsd2aQ9DA75 534 aa14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Upf1Q9EPU0 1124 aaKnown RBP14.78□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Zfp978A2A7I1 335 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Srp54bE9PXC0 504 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gpd1P13707 349 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Lrrtm2Q8BGA3 515 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 PxkQ8BX57 582 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Cldn17Q8BXA6 224 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tmem125Q8CHQ6 216 aa14.77□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms