RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 SLC35A4Q96G79 324 aa9.74□□□□□ -0.85
VPS25-203ENST00000589520 C16orf58Q96GQ5 468 aa9.74□□□□□ -0.85
VPS25-203ENST00000589520 Q96MT0 163 aa9.74□□□□□ -0.85
VPS25-203ENST00000589520 ARHGDIGQ99819 225 aa9.74□□□□□ -0.85
VPS25-203ENST00000589520 PELOQ9BRX2 385 aaKnown RBP9.74□□□□□ -0.85
VPS25-203ENST00000589520 UCK2Q9BZX2 261 aa9.74□□□□□ -0.85
VPS25-203ENST00000589520 SAP130Q9H0E3 1048 aa9.74□□□□□ -0.85
VPS25-203ENST00000589520 TBC1D17Q9HA65 648 aa9.74□□□□□ -0.85
VPS25-203ENST00000589520 PDE7BQ9NP56 450 aa9.74□□□□□ -0.85
VPS25-203ENST00000589520 C2orf42Q9NWW7 574 aa9.74□□□□□ -0.85
VPS25-203ENST00000589520 PCDHGA6Q9Y5G7 932 aa9.74□□□□□ -0.85
VPS25-203ENST00000589520 SYNDIG1LA6NDD5 238 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 SLC9B1P1A6NJY1 282 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 RHPN2P1A8MT19 583 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 H0YIG0 161 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 J3KTA2 159 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 FFAR1O14842 300 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 CTNSO60931 367 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 RECKO95980 971 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 GASTP01350 101 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 RNH1P13489 461 aaKnown RBP9.73□□□□□ -0.85
VPS25-203ENST00000589520 PVRP15151 417 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 ST6GAL1P15907 406 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 IL7RP16871 459 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 TYRP1P17643 537 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 ELAVL4P26378 380 aaKnown RBP9.73□□□□□ -0.85
VPS25-203ENST00000589520 KRT20P35900 424 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 GPR3P46089 330 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 YAP1P46937 504 aaKnown RBP9.73□□□□□ -0.85
VPS25-203ENST00000589520 AFF3P51826 1226 aaKnown RBP9.73□□□□□ -0.85
VPS25-203ENST00000589520 MAZP56270 477 aaKnown RBP9.73□□□□□ -0.85
VPS25-203ENST00000589520 MAP4K2Q12851 820 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 DUSP8Q13202 625 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 PMS2P3Q13401 168 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 NPTX1Q15818 432 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 ZNF750Q32MQ0 723 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 ZNF770Q6IQ21 691 aaPredicted RBP9.73□□□□□ -0.85
VPS25-203ENST00000589520 LAIR2Q6ISS4 152 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 DEF8Q6ZN54 512 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 B3GNT8Q7Z7M8 397 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 ARHGEF39Q8N4T4 335 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 FRMD1Q8N878 549 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 AQP11Q8NBQ7 271 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 ZNF540Q8NDQ6 660 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 OR7G2Q8NG99 324 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 RAB2BQ8WUD1 216 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 OIT3Q8WWZ8 545 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 RORBQ92753 470 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 KAT2AQ92830 837 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 TMIGD2Q96BF3 282 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 CTHRC1Q96CG8 243 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 HSPA12BQ96MM6 686 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 FOXQ1Q9C009 403 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 MIR1-1HGQ9H1L0 117 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 SLC38A1Q9H2H9 487 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 KRCC1Q9NPI7 259 aaPredicted RBP9.73□□□□□ -0.85
VPS25-203ENST00000589520 TIMMDC1Q9NPL8 285 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 IMPAD1Q9NX62 359 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 A4GNTQ9UNA3 340 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 SIT1Q9Y3P8 196 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 LRP4O75096 1905 aa9.73□□□□□ -0.85
VPS25-203ENST00000589520 SH3PXD2BA1X283 911 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 FITM1A5D6W6 292 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 TRIM64BA6NI03 449 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 C19orf67A6NJJ6 358 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 ZNF99A8MXY4 864 aaPredicted RBP9.72□□□□□ -0.85
VPS25-203ENST00000589520 PTGES3LE9PB15 166 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 STK25O00506 426 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 AP3D1O14617 1153 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 BCAT2O15382 392 aaPredicted RBP9.72□□□□□ -0.85
VPS25-203ENST00000589520 CHST10O43529 356 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 NUDT21O43809 227 aaKnown RBP9.72□□□□□ -0.85
VPS25-203ENST00000589520 OR10H3O60404 316 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 FAM20BO75063 409 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 STX11O75558 287 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 OR5F1O95221 314 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 ZBTB11O95625 1053 aaPredicted RBP9.72□□□□□ -0.85
VPS25-203ENST00000589520 DBIP07108 87 aaKnown RBP9.72□□□□□ -0.85
VPS25-203ENST00000589520 CYP4B1P13584 511 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 AGXTP21549 392 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 NT5EP21589 574 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 ALDH4A1P30038 563 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 GPLD1P80108 840 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 IGLV3-21P80748 117 aaPredicted RBP9.72□□□□□ -0.85
VPS25-203ENST00000589520 CHRNEQ04844 493 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 ZP2Q05996 745 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 FUT5Q11128 374 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 SERTAD2Q14140 314 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 GANABQ14697 944 aaKnown RBP9.72□□□□□ -0.85
VPS25-203ENST00000589520 GRM7Q14831 915 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 TRAM2Q15035 370 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 ZNHIT3Q15649 155 aaPredicted RBP9.72□□□□□ -0.85
VPS25-203ENST00000589520 NEDD8Q15843 81 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 PRICKLE4Q2TBC4 344 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 FGD3Q5JSP0 725 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 C6orf132Q5T0Z8 1188 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 FHL5Q5TD97 284 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 YOD1Q5VVQ6 348 aaPredicted RBP9.72□□□□□ -0.85
VPS25-203ENST00000589520 XAF1Q6GPH4 301 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 C1orf94Q6P1W5 598 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms