RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 ERP27Q96DN0 273 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 FAM120BQ96EK7 910 aaKnown RBP11.63□□□□□ -0.55
RETREG3-203ENST00000585894 C16orf58Q96GQ5 468 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 YIPF4Q9BSR8 244 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 CCDC134Q9H6E4 229 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 SDR39U1Q9NRG7 319 aaPredicted RBP11.63□□□□□ -0.55
RETREG3-203ENST00000585894 TAS2R9Q9NYW1 312 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 GPR55Q9Y2T6 319 aaPredicted RBP11.63□□□□□ -0.55
RETREG3-203ENST00000585894 NPFFR2Q9Y5X5 522 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 NME2P1O60361 137 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 COQ9O75208 318 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 SLC22A3O75751 556 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 BCAS2O75934 225 aaPredicted RBP11.63□□□□□ -0.55
RETREG3-203ENST00000585894 WISP2O76076 250 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 NME2P22392 152 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 S100A3P33764 101 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 PIGAP37287 484 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 PPICP45877 212 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 PSG6Q00889 435 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 GSTA3Q16772 222 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 PRAMEF20Q5VT98 475 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 BICRALQ6AI39 1079 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 SLC44A2Q8IWA5 706 aaPredicted RBP11.63□□□□□ -0.55
RETREG3-203ENST00000585894 TAGAPQ8N103 731 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 CPSF7Q8N684 471 aaKnown RBP11.63□□□□□ -0.55
RETREG3-203ENST00000585894 HORMAD2Q8N7B1 307 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 PSD4Q8NDX1 1056 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 OR8J2Q8NGG1 315 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 GRHL3Q8TE85 626 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 OR5P2Q8WZ92 322 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 TMBIM1Q969X1 311 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 TMEM125Q96AQ2 219 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 OMA1Q96E52 524 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 GIMAP5Q96F15 307 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 RILPQ96NA2 401 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 BTBD9Q96Q07 612 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 CCDC28BQ9BUN5 200 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 TMEM120AQ9BXJ8 343 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 TSPAN10Q9H1Z9 355 aaPredicted RBP11.63□□□□□ -0.55
RETREG3-203ENST00000585894 ZCCHC3Q9NUD5 404 aaKnown RBP11.63□□□□□ -0.55
RETREG3-203ENST00000585894 CFL2Q9Y281 166 aa11.63□□□□□ -0.55
RETREG3-203ENST00000585894 COPG1Q9Y678 874 aaKnown RBP11.63□□□□□ -0.55
RETREG3-203ENST00000585894 GCN1Q92616 2671 aaKnown RBP11.63□□□□□ -0.55
RETREG3-203ENST00000585894 GXYLT2A0PJZ3 443 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 FRG2CA6NGY1 282 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 EMC8O43402 210 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 SLITRK5O94991 958 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 ACP2P11117 423 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 DDX5P17844 614 aaKnown RBP11.62□□□□□ -0.55
RETREG3-203ENST00000585894 DRD5P21918 477 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 CASP9P55211 416 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 RPS26P62854 115 aaKnown RBP11.62□□□□□ -0.55
RETREG3-203ENST00000585894 PLCXD2Q0VAA5 305 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 GAB1Q13480 694 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 TP53BP2Q13625 1128 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 MLC1Q15049 377 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 SPDYE7PQ495Y7 208 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 TIGD2Q4W5G0 525 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 RTL4Q6ZR62 310 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 GALNT10Q86SR1 603 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 ZNF605Q86T29 641 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 SULF2Q8IWU5 870 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 MIER2Q8N344 545 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 C17orf47Q8NEP4 570 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 OR4A15Q8NGL6 344 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 MS4A4EQ96PG1 132 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 ZNF317Q96PQ6 595 aaPredicted RBP11.62□□□□□ -0.55
RETREG3-203ENST00000585894 ZBTB18Q99592 522 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 INPP5KQ9BT40 448 aa11.62□□□□□ -0.55
RETREG3-203ENST00000585894 ZGRF1Q86YA3 2104 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 RNASET2O00584 256 aaKnown RBP11.61□□□□□ -0.55
RETREG3-203ENST00000585894 RASAL1O95294 804 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 HMGN2P05204 90 aaKnown RBP11.61□□□□□ -0.55
RETREG3-203ENST00000585894 PGRP06401 933 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 NCF2P19878 526 aaPredicted RBP11.61□□□□□ -0.55
RETREG3-203ENST00000585894 CDKN2CP42773 168 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 RFX3P48380 749 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 DNASE1L1P49184 302 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 CCT3P49368 545 aaKnown RBP11.61□□□□□ -0.55
RETREG3-203ENST00000585894 MEOX1P50221 254 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 SEC24CP53992 1094 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 NRG3P56975 720 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 LASP1Q14847 261 aaKnown RBP11.61□□□□□ -0.55
RETREG3-203ENST00000585894 RNFT1Q5M7Z0 435 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 DNAJC14Q6Y2X3 702 aaPredicted RBP11.61□□□□□ -0.55
RETREG3-203ENST00000585894 SLC15A4Q8N697 577 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 TMEM178AQ8NBL3 297 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 PSMA8Q8TAA3 256 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 PIK3R3Q92569 461 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 SLC9A6Q92581 669 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 JADE3Q92613 823 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 VPS33AQ96AX1 596 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 EFHD2Q96C19 240 aaPredicted RBP11.61□□□□□ -0.55
RETREG3-203ENST00000585894 OR52E6Q96RD3 313 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 C3orf14Q9HBI5 128 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 TIMMDC1Q9NPL8 285 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 ZIM2Q9NZV7 527 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 MAPRE3Q9UPY8 281 aa11.61□□□□□ -0.55
RETREG3-203ENST00000585894 OR10H1Q9Y4A9 318 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms