RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 NUP54Q7Z3B4 507 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 OR1J4Q8NGS1 313 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 ZNF675Q8TD23 568 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 NODALQ96S42 347 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 OSBPL11Q9BXB4 747 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 TRIM8Q9BZR9 551 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 ACKR4Q9NPB9 350 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 C15orf41Q9Y2V0 281 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 PTGDR2Q9Y5Y4 395 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 CENPEQ02224 2701 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 EML6Q6ZMW3 1958 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 FRG2CA6NGY1 282 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 RGS16O15492 202 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 UGT2B11O75310 529 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 SEC22BO75396 215 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 REM1O75628 298 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 RSL1D1O76021 490 aaKnown RBP11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 JUNP05412 331 aaKnown RBP11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 GABRA1P14867 456 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 NAGAP17050 411 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 DRD5P21918 477 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 KRT20P35900 424 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 NCBP2P52298 156 aaKnown RBP eCLIP11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 CORO7P57737 925 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 ZNF155Q12901 538 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 RTL6Q6ICC9 239 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 ZCCHC23Q6ZST2 131 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 TRIM46Q7Z4K8 759 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 LILRB4Q8NHJ6 448 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 HGDQ93099 445 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 TMBIM1Q969X1 311 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 TMEM41AQ96HV5 264 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 CENPHQ9H3R5 247 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 GALNT9Q9HCQ5 603 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 MAPRE3Q9UPY8 281 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 SLC6A5Q9Y345 797 aa11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 NCOA6Q14686 2063 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-213ENST00000573519 A0A0G2JNJ9 132 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 PRAMEF25A6NGN4 478 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 ENO4A6NNW6 628 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 SLC28A1O00337 649 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 AZIN1O14977 448 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 RGS14O43566 566 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 ICOSLGO75144 302 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 ERN1O75460 977 aaKnown RBP11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 CHEK2O96017 543 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 HPNP05981 417 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 CHRNGP07510 517 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 ELAVL4P26378 380 aaKnown RBP11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 IL12BP29460 328 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 NTSP30990 170 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 ZFP36L2P47974 494 aaKnown RBP11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 CDK9P50750 372 aaKnown RBP11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 EIPR1Q53HC9 387 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 WIPI1Q5MNZ9 446 aaPredicted RBP11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 SH2D4BQ5SQS7 431 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 CEP85LQ5SZL2 805 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 FNDC7Q5VTL7 733 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 TIGD3Q6B0B8 471 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 FAM71E1Q6IPT2 247 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 NOXRED1Q6NXP6 359 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 SLC30A6Q6NXT4 461 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 TMEM107Q6UX40 140 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 ULK2Q8IYT8 1036 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 ZNF295-AS1Q8N0V1 137 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 OR7G2Q8NG99 324 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 GFM2Q969S9 779 aaKnown RBP11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 TMCO6Q96DC7 493 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 ERP27Q96DN0 273 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 C11orf24Q96F05 449 aaPredicted RBP11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 COL21A1Q96P44 957 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 ZIM3Q96PE6 472 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 ADOQ96SZ5 270 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 SPOCK3Q9BQ16 436 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 FOLH1BQ9HBA9 442 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 MYNNQ9NPC7 610 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 SIRT5Q9NXA8 310 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 TAS2R9Q9NYW1 312 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 Q9UFV3 132 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 CAMK2AQ9UQM7 478 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 GPR55Q9Y2T6 319 aaPredicted RBP11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 OR10H1Q9Y4A9 318 aa11.61□□□□□ -0.55
NPLOC4-213ENST00000573519 TMEM233B4DJY2 109 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 FAM47E-STBD1D6RA91 191 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 TYROBPO43914 113 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 COQ9O75208 318 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 TOXO94900 526 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 HOXD4P09016 255 aaPredicted RBP11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 PTPN6P29350 595 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 SSTR2P30874 369 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 GCKP35557 465 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 ADH7P40394 386 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 MC3RP41968 323 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 CRYZQ08257 329 aaKnown RBP11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 CEBPEQ15744 281 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 PRSS53Q2L4Q9 553 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 ARL13AQ5H913 290 aaPredicted RBP11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 NPSR1Q6W5P4 371 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 LARP4Q71RC2 724 aaKnown RBP eCLIP11.6□□□□□ -0.555e-6■■□□□ 12.4
NPLOC4-213ENST00000573519 WDR53Q7Z5U6 358 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms