RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 PILRBQ9UKJ0 227 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 ARL5CA6NH57 179 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 MAGEB2O15479 319 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 KINO60870 393 aaKnown RBP2.47□□□□□ -2.01
SCFD1-219ENST00000556413 SEMA4FO95754 770 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 DNTTP04053 509 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 QDPRP09417 244 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 HOXB8P17481 243 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-219ENST00000556413 EEF1B2P24534 225 aaKnown RBP2.47□□□□□ -2.01
SCFD1-219ENST00000556413 CCR2P41597 374 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 MATKP42679 507 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 MTCP1P56278 107 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 MZT1Q08AG7 82 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 LAMTOR4Q0VGL1 99 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 ILF2Q12905 390 aaKnown RBP2.47□□□□□ -2.01
SCFD1-219ENST00000556413 CYLC2Q14093 348 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-219ENST00000556413 TTC31Q49AM3 519 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-219ENST00000556413 NHLRC3Q5JS37 347 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 MFSD4BQ5TF39 518 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 MARC1Q5VT66 337 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 CST9LP1Q5W188 147 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 TMEM184AQ6ZMB5 413 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 C5orf24Q7Z6I8 188 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 PIGWQ7Z7B1 504 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 NME8Q8N427 588 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 RYBPQ8N488 228 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-219ENST00000556413 LSMEM1Q8N8F7 131 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 RNF149Q8NC42 400 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 CAMKVQ8NCB2 501 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 CRYGNQ8WXF5 182 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 FGF13Q92913 245 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 EXT2Q93063 718 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 ESAMQ96AP7 390 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 CEP170P1Q96L14 293 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 CFAP57Q96MR6 1250 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 SDHCQ99643 169 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-219ENST00000556413 LXNQ9BS40 222 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 KATNB1Q9BVA0 655 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 MRPL9Q9BYD2 267 aaKnown RBP2.47□□□□□ -2.01
SCFD1-219ENST00000556413 TXLNGYQ9BZA5 131 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 GCOM2Q9BZD3 368 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-219ENST00000556413 SDCBP2Q9H190 292 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 POLR3FQ9H1D9 316 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-219ENST00000556413 RIMS4Q9H426 269 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-219ENST00000556413 ASB8Q9H765 288 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 XAB2Q9HCS7 855 aaKnown RBP2.47□□□□□ -2.01
SCFD1-219ENST00000556413 ZDHHC4Q9NPG8 344 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 XPNPEP1Q9NQW7 623 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 MRPL17Q9NRX2 175 aaKnown RBP2.47□□□□□ -2.01
SCFD1-219ENST00000556413 AGPAT5Q9NUQ2 364 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 IL36AQ9UHA7 158 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 LIPGQ9Y5X9 500 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 NCOR2Q9Y618 2525 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 COL1A2P08123 1366 aa2.47□□□□□ -2.01
SCFD1-219ENST00000556413 FRYQ5TBA9 3013 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 SYNDIG1LA6NDD5 238 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 LRRIQ4A6NIV6 560 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 A8MXE2 369 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 H3BMM5 538 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 TNFSF12O43508 249 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 PRAF2O60831 178 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 ERLIN2O94905 339 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 ZNF32P17041 273 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 ARF4P18085 180 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-219ENST00000556413 GLRA2P23416 452 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 FCARP24071 287 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 TMOD1P28289 359 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 RPL34P49207 117 aaKnown RBP2.46□□□□□ -2.02
SCFD1-219ENST00000556413 AKAP17AQ02040 695 aaKnown RBP2.46□□□□□ -2.02
SCFD1-219ENST00000556413 PRPF4BQ13523 1007 aaKnown RBP2.46□□□□□ -2.02
SCFD1-219ENST00000556413 CAMK2DQ13557 499 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 RASA2Q15283 850 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 PSMD5Q16401 504 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 TAZQ16635 292 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 TIMM50Q3ZCQ8 353 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 KRBOX4Q5JUW0 171 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 PPM1LQ5SGD2 360 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 LIN9Q5TKA1 542 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 PAMR1Q6UXH9 720 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 MFN1Q8IWA4 741 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 NECAB1Q8N987 351 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 OR4C15Q8NGM1 316 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 OR5M9Q8NGP3 310 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 FLVCR1-AS1Q8TAF5 88 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 C18orf25Q96B23 403 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-219ENST00000556413 PYCR2Q96C36 320 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 NXPE2Q96DL1 559 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 RBM41Q96IZ5 413 aaKnown RBP2.46□□□□□ -2.02
SCFD1-219ENST00000556413 LZTS2Q9BRK4 669 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 NAA11Q9BSU3 229 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-219ENST00000556413 NT5C3AQ9H0P0 336 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 C6orf50Q9HD87 102 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 NRBP2Q9NSY0 501 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 RBM28Q9NW13 759 aaKnown RBP2.46□□□□□ -2.02
SCFD1-219ENST00000556413 EPS15L1Q9UBC2 864 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 Q9UF83 564 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 TUBGCP4Q9UGJ1 667 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 FBXL4Q9UKA2 621 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 GMEB2Q9UKD1 530 aa2.46□□□□□ -2.02
SCFD1-219ENST00000556413 CACNA1HO95180 2353 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms