RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 CPT1CQ8TCG5 803 aa11.82□□□□□ -0.52
VEGFA-224ENST00000523873 GRHL3Q8TE85 626 aa11.82□□□□□ -0.52
VEGFA-224ENST00000523873 TMEM125Q96AQ2 219 aa11.82□□□□□ -0.52
VEGFA-224ENST00000523873 TESCQ96BS2 214 aa11.82□□□□□ -0.52
VEGFA-224ENST00000523873 ERP27Q96DN0 273 aa11.82□□□□□ -0.52
VEGFA-224ENST00000523873 OMA1Q96E52 524 aa11.82□□□□□ -0.52
VEGFA-224ENST00000523873 FAM120BQ96EK7 910 aaKnown RBP11.82□□□□□ -0.52
VEGFA-224ENST00000523873 GIMAP5Q96F15 307 aa11.82□□□□□ -0.52
VEGFA-224ENST00000523873 C16orf58Q96GQ5 468 aa11.82□□□□□ -0.52
VEGFA-224ENST00000523873 YIPF4Q9BSR8 244 aa11.82□□□□□ -0.52
VEGFA-224ENST00000523873 CCDC28BQ9BUN5 200 aa11.82□□□□□ -0.52
VEGFA-224ENST00000523873 DEPPQ9NTK1 212 aa11.82□□□□□ -0.52
VEGFA-224ENST00000523873 TAS2R9Q9NYW1 312 aa11.82□□□□□ -0.52
VEGFA-224ENST00000523873 GPR55Q9Y2T6 319 aaPredicted RBP11.82□□□□□ -0.52
VEGFA-224ENST00000523873 NPFFR2Q9Y5X5 522 aa11.82□□□□□ -0.52
VEGFA-224ENST00000523873 SPTA1P02549 2419 aa11.82□□□□□ -0.52
VEGFA-224ENST00000523873 BOD1L1Q8NFC6 3051 aa11.82□□□□□ -0.52
VEGFA-224ENST00000523873 A0A0G2JND7 137 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 GXYLT2A0PJZ3 443 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 FRG2CA6NGY1 282 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 EMC8O43402 210 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 SCN2BO60939 215 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 SLC22A3O75751 556 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 WISP2O76076 250 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 SLITRK5O94991 958 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 RASAL1O95294 804 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 C1QCP02747 245 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 DRD5P21918 477 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 ABCD3P28288 659 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 S100A3P33764 101 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 PPICP45877 212 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 MEOX1P50221 254 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 CLNS1AP54105 237 aaKnown RBP11.81□□□□□ -0.52
VEGFA-224ENST00000523873 PSG6Q00889 435 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 PLCXD2Q0VAA5 305 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 GSTA3Q16772 222 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 PRAMEF20Q5VT98 475 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 BICRALQ6AI39 1079 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 RPUSD3Q6P087 351 aaKnown RBP11.81□□□□□ -0.52
VEGFA-224ENST00000523873 GPALPP1Q8IXQ4 340 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 CPSF7Q8N684 471 aaKnown RBP11.81□□□□□ -0.52
VEGFA-224ENST00000523873 SLC15A4Q8N697 577 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 HORMAD2Q8N7B1 307 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 TMEM178AQ8NBL3 297 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 C17orf47Q8NEP4 570 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 OR8J2Q8NGG1 315 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 OR4A15Q8NGL6 344 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 TMBIM1Q969X1 311 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 HSPBAP1Q96EW2 488 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 RILPQ96NA2 401 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 BTBD9Q96Q07 612 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 INPP5KQ9BT40 448 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 TMEM120AQ9BXJ8 343 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 CCDC134Q9H6E4 229 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 TIMMDC1Q9NPL8 285 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 SDR39U1Q9NRG7 319 aaPredicted RBP11.81□□□□□ -0.52
VEGFA-224ENST00000523873 ZCCHC3Q9NUD5 404 aaKnown RBP11.81□□□□□ -0.52
VEGFA-224ENST00000523873 MAPRE3Q9UPY8 281 aa11.81□□□□□ -0.52
VEGFA-224ENST00000523873 COPG1Q9Y678 874 aaKnown RBP11.81□□□□□ -0.52
VEGFA-224ENST00000523873 DNAJC13O75165 2243 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 ZNF407Q9C0G0 2248 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 RNASET2O00584 256 aaKnown RBP11.8□□□□□ -0.52
VEGFA-224ENST00000523873 PEX1O43933 1283 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 ACP2P11117 423 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 PLA2G2AP14555 144 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 PIGAP37287 484 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 CDKN2CP42773 168 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 DNASE1L1P49184 302 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 CCT3P49368 545 aaKnown RBP11.8□□□□□ -0.52
VEGFA-224ENST00000523873 NRG3P56975 720 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 DCAF7P61962 342 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 GAB1Q13480 694 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 TP53BP2Q13625 1128 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 LASP1Q14847 261 aaKnown RBP11.8□□□□□ -0.52
VEGFA-224ENST00000523873 NTRK2Q16620 822 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 SPDYE7PQ495Y7 208 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 SLC34A3Q8N130 599 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 MIER2Q8N344 545 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 NATD1Q8N6N6 113 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 PIK3R3Q92569 461 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 EFHD2Q96C19 240 aaPredicted RBP11.8□□□□□ -0.52
VEGFA-224ENST00000523873 FRMD6Q96NE9 622 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 MS4A4EQ96PG1 132 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 OR52E6Q96RD3 313 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 NODALQ96S42 347 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 ZBTB18Q99592 522 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 LMF2Q9BU23 707 aaKnown RBP11.8□□□□□ -0.52
VEGFA-224ENST00000523873 TSPAN10Q9H1Z9 355 aaPredicted RBP11.8□□□□□ -0.52
VEGFA-224ENST00000523873 C3orf14Q9HBI5 128 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 SH2D2AQ9NP31 389 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 ZIM2Q9NZV7 527 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 CNOT11Q9UKZ1 510 aaKnown RBP11.8□□□□□ -0.52
VEGFA-224ENST00000523873 OR10H1Q9Y4A9 318 aa11.8□□□□□ -0.52
VEGFA-224ENST00000523873 CHCHD2Q9Y6H1 151 aaPredicted RBP11.8□□□□□ -0.52
VEGFA-224ENST00000523873 SMG1Q96Q15 3661 aaKnown RBP11.79□□□□□ -0.52
VEGFA-224ENST00000523873 SPENQ96T58 3664 aaKnown RBP11.79□□□□□ -0.52
VEGFA-224ENST00000523873 CDK2AP1O14519 115 aa11.79□□□□□ -0.52
VEGFA-224ENST00000523873 TO15178 435 aa11.79□□□□□ -0.52
VEGFA-224ENST00000523873 ACOX3O15254 700 aa11.79□□□□□ -0.52
VEGFA-224ENST00000523873 UGT2B11O75310 529 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms