RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	UTP20	O75691	2785 aa	Known RBP	12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	DOPEY1	Q5JWR5	2465 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	FRG2C	A6NGY1	282 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	NPIPA2	E9PIF3	369 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	NPIPA3	F8WFD2	350 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ACOX3	O15254	700 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	PLOD3	O60568	738 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ERN1	O75460	977 aa	Known RBP	12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	REM1	O75628	298 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	RFPL3S	P0C7P2	107 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	DHRS4L1	P0CG22	281 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	BCKDHA	P12694	445 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	NAGA	P17050	411 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	BGN	P21810	368 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	CASP3	P42574	277 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	MASP1	P48740	699 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	CORO7	P57737	925 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ZNF155	Q12901	538 aa	Predicted RBP	12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	HSPB3	Q12988	150 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ATP6AP1L	Q52LC2	224 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	TBCEL	Q5QJ74	424 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	HHAT	Q5VTY9	493 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	MTFR2	Q6P444	385 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ZNF551	Q7Z340	670 aa	Predicted RBP	12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	MRGPRG	Q86SM5	289 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	SLC34A3	Q8N130	599 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ZNF781	Q8N8C0	355 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	FAM57A	Q8TBR7	257 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	TMBIM1	Q969X1	311 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	CIDEC	Q96AQ7	238 aa	Predicted RBP	12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	TUBGCP3	Q96CW5	907 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	PPP1R36	Q96LQ0	422 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ZNF597	Q96LX8	424 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	AMDHD1	Q96NU7	426 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	C1orf50	Q9BV19	199 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	STMN4	Q9H169	189 aa	Predicted RBP	12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	REEP4	Q9H6H4	257 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	METTL7A	Q9H8H3	244 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	PLSCR2	Q9NRY7	297 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	TNFRSF10D	Q9UBN6	386 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	MEMO1	Q9Y316	297 aa		12.98	□□□□□ -0.33
CCHCR1-222	ENST00000507459	PCNX1	Q96RV3	2341 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ANKRD33B	A6NCL7	494 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	LRRC3C	A6NJW4	275 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	TMEM114	B3SHH9	223 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	GNB5	O14775	395 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	PDPK1	O15530	556 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	COQ9	O75208	318 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	UGT2B11	O75310	529 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	CT45A8	P0DMV1	189 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	CT45A9	P0DMV2	189 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	EFNA1	P20827	205 aa	Predicted RBP	12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	MAPK1	P28482	360 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	GPC1	P35052	558 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ASMT	P46597	345 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	SLC1A6	P48664	564 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ADORA2A-AS1	P86434	159 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	PDCD2	Q16342	344 aa	Predicted RBP	12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	HYAL4	Q2M3T9	481 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ZNF385B	Q569K4	471 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	CT45A2	Q5DJT8	189 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	XKR7	Q5GH72	579 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	C6orf136	Q5SQH8	315 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	NPSR1	Q6W5P4	371 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	TRIL	Q7L0X0	811 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	NUP54	Q7Z3B4	507 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	PACS2	Q86VP3	889 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	SLC44A2	Q8IWA5	706 aa	Predicted RBP	12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	LIX1	Q8N485	282 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	FNDC5	Q8NAU1	212 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	OR5M9	Q8NGP3	310 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	MGARP	Q8TDB4	240 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ITLN2	Q8WWU7	325 aa	Predicted RBP	12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ELP4	Q96EB1	424 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	VSTM2L	Q96N03	204 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	BTBD9	Q96Q07	612 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	NODAL	Q96S42	347 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	SECISBP2	Q96T21	854 aa	Known RBP	12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ANGPTL4	Q9BY76	406 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	C20orf27	Q9GZN8	174 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ZNF703	Q9H7S9	590 aa	Predicted RBP	12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	DDX18	Q9NVP1	670 aa	Known RBP	12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	B4GALT7	Q9UBV7	327 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459	OR10H1	Q9Y4A9	318 aa		12.97	□□□□□ -0.33
CCHCR1-222	ENST00000507459		A0A087WV62	115 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	TRGV5	A0A0B4J1U4	118 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	TMEM120B	A0PK00	339 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	C2orf72	A6NCS6	295 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	UPK1A	O00322	258 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	T	O15178	435 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	TRIM3	O75382	744 aa	Predicted RBP	12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	TRAPPC6A	O75865	159 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	SNX4	O95219	450 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	IGHG3	P01860	377 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	GRK2	P25098	689 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	GDF1	P27539	372 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	KRT20	P35900	424 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	TRPC1	P48995	793 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	MAN2A2	P49641	1150 aa		12.96	□□□□□ -0.33

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