RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 CCDC159P0C7I6 412 aa23.06■■□□□ 1.28
DHFR-203ENST00000505337 GABRA4P48169 554 aa23.06■■□□□ 1.28
DHFR-203ENST00000505337 COL9A2Q14055 689 aaPredicted RBP23.06■■□□□ 1.28
DHFR-203ENST00000505337 GPAT3Q53EU6 434 aa23.06■■□□□ 1.28
DHFR-203ENST00000505337 C6orf132Q5T0Z8 1188 aa23.06■■□□□ 1.28
DHFR-203ENST00000505337 TSPYL5Q86VY4 417 aaPredicted RBP23.06■■□□□ 1.28
DHFR-203ENST00000505337 CNIH3Q8TBE1 160 aa23.06■■□□□ 1.28
DHFR-203ENST00000505337 ZNF285Q96NJ3 590 aa23.06■■□□□ 1.28
DHFR-203ENST00000505337 NIPSNAP1Q9BPW8 284 aa23.06■■□□□ 1.28
DHFR-203ENST00000505337 UCKL1Q9NWZ5 548 aa23.06■■□□□ 1.28
DHFR-203ENST00000505337 CALML5Q9NZT1 146 aa23.06■■□□□ 1.28
DHFR-203ENST00000505337 RHCGQ9UBD6 479 aa23.06■■□□□ 1.28
DHFR-203ENST00000505337 CACNA1EQ15878 2313 aa23.06■■□□□ 1.28
DHFR-203ENST00000505337 SGK494L7N484 410 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 SRPX2O60687 465 aaPredicted RBP23.05■■□□□ 1.28
DHFR-203ENST00000505337 LDB3O75112 727 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 RDH16O75452 317 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 CCNB2O95067 398 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 GSTT1P30711 240 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 NUP107P57740 925 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 ID2Q02363 134 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 RSPO4Q2I0M5 234 aaPredicted RBP23.05■■□□□ 1.28
DHFR-203ENST00000505337 EXOSC6Q5RKV6 272 aaKnown RBP23.05■■□□□ 1.28
DHFR-203ENST00000505337 BROXQ5VW32 411 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 ZNF770Q6IQ21 691 aaPredicted RBP23.05■■□□□ 1.28
DHFR-203ENST00000505337 RBM45Q8IUH3 476 aaKnown RBP23.05■■□□□ 1.28
DHFR-203ENST00000505337 VANGL1Q8TAA9 524 aaPredicted RBP23.05■■□□□ 1.28
DHFR-203ENST00000505337 TANKQ92844 425 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 ALPK1Q96QP1 1244 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 ANKHQ9HCJ1 492 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 FOXD2O60548 495 aaPredicted RBP23.05■■□□□ 1.28
DHFR-203ENST00000505337 ABCB7O75027 752 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 SLITRK5O94991 958 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 GPR75O95800 540 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 HTR1AP08908 422 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 RPP38P78345 283 aaKnown RBP23.05■■□□□ 1.28
DHFR-203ENST00000505337 FAM214AQ32MH5 1076 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 FAM92BQ6ZTR7 304 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 KCTD8Q6ZWB6 473 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 OR9A4Q8NGU2 314 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 SLC35A4Q96G79 324 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 PINK1Q9BXM7 581 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 RAB33BQ9H082 229 aa23.05■■□□□ 1.28
DHFR-203ENST00000505337 NMNAT1Q9HAN9 279 aaPredicted RBP23.05■■□□□ 1.28
DHFR-203ENST00000505337 C19orf53Q9UNZ5 99 aaPredicted RBP23.05■■□□□ 1.28
DHFR-203ENST00000505337 A0A087WV62 115 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.04■■□□□ 1.28
DHFR-203ENST00000505337 TLCD2A6NGC4 264 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 DUXAA6NLW8 204 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 H3BSA7 217 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 BCAT2O15382 392 aaPredicted RBP23.04■■□□□ 1.28
DHFR-203ENST00000505337 NME6O75414 186 aaPredicted RBP23.04■■□□□ 1.28
DHFR-203ENST00000505337 MED26O95402 600 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 ZIC2O95409 532 aaPredicted RBP23.04■■□□□ 1.28
DHFR-203ENST00000505337 ANGPTL1O95841 491 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 LGI1O95970 557 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 EEF1B2P24534 225 aaKnown RBP23.04■■□□□ 1.28
DHFR-203ENST00000505337 ELAVL4P26378 380 aaKnown RBP23.04■■□□□ 1.28
DHFR-203ENST00000505337 AFF3P51826 1226 aaKnown RBP23.04■■□□□ 1.28
DHFR-203ENST00000505337 EPHA4P54764 986 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 GFERP55789 205 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 MAD2L1BPQ15013 274 aaPredicted RBP23.04■■□□□ 1.28
DHFR-203ENST00000505337 ZBED5Q49AG3 693 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 ATAD3BQ5T9A4 648 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 DEF8Q6ZN54 512 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 GPR141Q7Z602 305 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 TAGAPQ8N103 731 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 PARP8Q8N3A8 854 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 SLC16A11Q8NCK7 471 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 SIMC1Q8NDZ2 872 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 ZNF675Q8TD23 568 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 SGCDQ92629 289 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 FUZQ9BT04 418 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 A4GNTQ9UNA3 340 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 PCDHGA6Q9Y5G7 932 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 COMMD3-BMI1R4GMX3 469 aa23.04■■□□□ 1.28
DHFR-203ENST00000505337 TRBV4-1A0A0J9YWV2 114 aa23.03■■□□□ 1.28
DHFR-203ENST00000505337 FAM227AF5H4B4 570 aa23.03■■□□□ 1.28
DHFR-203ENST00000505337 M0R3H8 397 aa23.03■■□□□ 1.28
DHFR-203ENST00000505337 AGR2O95994 175 aa23.03■■□□□ 1.28
DHFR-203ENST00000505337 ID4P47928 161 aa23.03■■□□□ 1.28
DHFR-203ENST00000505337 CXCR4P61073 352 aa23.03■■□□□ 1.28
DHFR-203ENST00000505337 ESRRGP62508 458 aa23.03■■□□□ 1.28
DHFR-203ENST00000505337 C16orf62Q7Z3J2 963 aa23.03■■□□□ 1.28
DHFR-203ENST00000505337 WDR53Q7Z5U6 358 aaPredicted RBP23.03■■□□□ 1.28
DHFR-203ENST00000505337 B3GNT8Q7Z7M8 397 aa23.03■■□□□ 1.28
DHFR-203ENST00000505337 ADAMTS15Q8TE58 950 aa23.03■■□□□ 1.28
DHFR-203ENST00000505337 ANKRD9Q96BM1 317 aaPredicted RBP23.03■■□□□ 1.28
DHFR-203ENST00000505337 CHRNA10Q9GZZ6 450 aa23.03■■□□□ 1.28
DHFR-203ENST00000505337 POLR1BQ9H9Y6 1135 aa23.03■■□□□ 1.28
DHFR-203ENST00000505337 PAK1IP1Q9NWT1 392 aaPredicted RBP23.03■■□□□ 1.28
DHFR-203ENST00000505337 DLL3Q9NYJ7 618 aa23.03■■□□□ 1.28
DHFR-203ENST00000505337 SLC9A8Q9Y2E8 581 aa23.03■■□□□ 1.28
DHFR-203ENST00000505337 ARID1BQ8NFD5 2236 aaPredicted RBP23.02■■□□□ 1.28
DHFR-203ENST00000505337 LNP1A1A4G5 178 aa23.02■■□□□ 1.28
DHFR-203ENST00000505337 SYT5O00445 386 aa23.02■■□□□ 1.28
DHFR-203ENST00000505337 KHNYNO15037 678 aaKnown RBP23.02■■□□□ 1.28
DHFR-203ENST00000505337 PLOD3O60568 738 aa23.02■■□□□ 1.28
DHFR-203ENST00000505337 JUNBP17275 347 aaPredicted RBP23.02■■□□□ 1.28
DHFR-203ENST00000505337 HOXD12P35452 270 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms