RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 B4DXG7 233 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 C16orf97H3BN30 126 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 PGRMC2O15173 223 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 PHGDHO43175 533 aaKnown RBP4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 CCNT2O60583 730 aaKnown RBP4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 TMCC2O75069 709 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 CBR3O75828 277 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 CGAP01215 116 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 THBDP07204 575 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 FAM58BPP0C7Q3 252 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 POU2F1P14859 743 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 CD1DP15813 335 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 ZNF708P17019 499 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 NAGAP17050 411 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 KRT15P19012 456 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 S1PR1P21453 382 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 GPX3P22352 226 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 IVDP26440 423 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 CNTFP26441 200 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 BSGP35613 385 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 PIK3CBP42338 1070 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 KIR2DL2P43627 348 aaPredicted RBP4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 FNTAP49354 379 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 STARP49675 285 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 RAP1GDS1P52306 607 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 ARFIP1P53367 373 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 NR1H2P55055 460 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 ATP5J2P56134 94 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 MGAT5Q09328 741 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 SNTA1Q13424 505 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 DDX39BQ13838 428 aaKnown RBP4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 PPP1R7Q15435 360 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 GUSBP1Q15486 140 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 HLA-DQA1Q5Y7H0 255 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 OR2A2Q6IF42 318 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 OR52E8Q6IFG1 317 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 GRHL2Q6ISB3 625 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 SLC30A6Q6NXT4 461 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 AAGABQ6PD74 315 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 ZNF704Q6ZNC4 412 aaPredicted RBP4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 PLCZ1Q86YW0 608 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 HIPK1Q86Z02 1210 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 PDIK1LQ8N165 341 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 CNEP1R1Q8N9A8 125 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 SPC24Q8NBT2 197 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 OR7G1Q8NGA0 311 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 OR14L1PQ8NHC6 308 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 RDH11Q8TC12 318 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 GRK7Q8WTQ7 553 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 CAVIN3Q969G5 261 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 OMA1Q96E52 524 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 PGM2Q96G03 612 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 ZC3HAV1LQ96H79 300 aaKnown RBP4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 NODALQ96S42 347 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 MTERF1Q99551 399 aaKnown RBP4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 CENPKQ9BS16 269 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 CD244Q9BZW8 370 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 RBSNQ9H1K0 784 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 OR10A5Q9H207 317 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 RHOJQ9H4E5 214 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 DDX31Q9H8H2 851 aaKnown RBP4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 CAB39LQ9H9S4 337 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 LYARQ9NX58 379 aaKnown RBP4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 ELOVL5Q9NYP7 299 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 TAS2R10Q9NYW0 307 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 MOCS1Q9NZB8 636 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 EHD3Q9NZN3 535 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 CD274Q9NZQ7 290 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 KLRF1Q9NZS2 232 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 ASIC3Q9UHC3 531 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 GDF2Q9UK05 429 aaPredicted RBP4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 FBXL2Q9UKC9 423 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 CR1P17927 2039 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 HEATR5AQ86XA9 2040 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 TGP01266 2768 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 FRG2CA6NGY1 282 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 K7EPI3 171 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 PGRMC1O00264 195 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 HS3ST1O14792 307 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 ACOX3O15254 700 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 PHF1O43189 567 aaPredicted RBP4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 EMC8O43402 210 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 KLF4O43474 513 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 TLX2O43763 284 aaPredicted RBP4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 CD5LO43866 347 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 ZIC3O60481 467 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 UGT2B11O75310 529 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 PIAS1O75925 651 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 PLAUP00749 431 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 GBAP04062 536 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 TP53P04637 393 aaPredicted RBP4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 CCDC166P0CW27 439 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 CD8BP10966 210 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 TCEA1P23193 301 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 PIK3R1P27986 724 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 CDC25BP30305 580 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 SRD5A2P31213 254 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 KCNJ5P48544 419 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 CLDN15P56746 228 aa4.62□□□□□ -1.67
SNRNP40-204ENST00000474025 B3GALT5-AS1P59052 145 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 344.6 ms