RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 CT45A2Q5DJT8 189 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 CMPK2Q5EBM0 449 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 IL23RQ5VWK5 629 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 C1QL3Q5VWW1 255 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 NPSR1Q6W5P4 371 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 BNC2Q6ZN30 1099 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-206ENST00000465877 ZNF551Q7Z340 670 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-206ENST00000465877 HDXQ7Z353 690 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 R3HCC1LQ7Z5L2 792 aaKnown RBP11.86□□□□□ -0.51
COL5A1-206ENST00000465877 SLC22A16Q86VW1 577 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 SLC34A3Q8N130 599 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 OR2L13Q8N349 312 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 SSC4DQ8WTU2 575 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 DIO2Q92813 273 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 OMA1Q96E52 524 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 ZBED6CLQ96FA7 236 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-206ENST00000465877 ZNF597Q96LX8 424 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 SH3GL2Q99962 352 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 NUF2Q9BZD4 464 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 ZNF703Q9H7S9 590 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-206ENST00000465877 VIPAS39Q9H9C1 493 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 PNPOQ9NVS9 261 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 ASIC5Q9NY37 505 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 TAS2R9Q9NYW1 312 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 NOP53Q9NZM5 478 aaKnown RBP11.86□□□□□ -0.51
COL5A1-206ENST00000465877 CNIH4Q9P003 139 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 SH3BP4Q9P0V3 963 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 EIF3LQ9Y262 564 aaKnown RBP11.86□□□□□ -0.51
COL5A1-206ENST00000465877 LRRC3CA6NJW4 275 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 UPK1AO00322 258 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 PLOD2O00469 737 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 TO15178 435 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 CDC40O60508 579 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL5A1-206ENST00000465877 DDX5P17844 614 aaKnown RBP11.85□□□□□ -0.51
COL5A1-206ENST00000465877 DRD5P21918 477 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 GPC1P35052 558 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 MAGEA5P43359 124 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 CDK9P50750 372 aaKnown RBP11.85□□□□□ -0.51
COL5A1-206ENST00000465877 PPIAP62937 165 aaKnown RBP11.85□□□□□ -0.51
COL5A1-206ENST00000465877 RPP38P78345 283 aaKnown RBP11.85□□□□□ -0.51
COL5A1-206ENST00000465877 SMU1Q2TAY7 513 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 TBCELQ5QJ74 424 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 ATG16L1Q676U5 607 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 BICRALQ6AI39 1079 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 CHERPQ8IWX8 916 aaKnown RBP11.85□□□□□ -0.51
COL5A1-206ENST00000465877 TRIM42Q8IWZ5 723 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 FAM109AQ8N4B1 249 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 KRTCAP2Q8N6L1 136 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 OR7A2PQ8NGA2 310 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 OR52N2Q8NGI0 321 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 SPPL2AQ8TCT8 520 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 ELP4Q96EB1 424 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 SECISBP2Q96T21 854 aaKnown RBP11.85□□□□□ -0.51
COL5A1-206ENST00000465877 DOHHQ9BU89 302 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 AKTIPQ9H8T0 292 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 ZDHHC11Q9H8X9 412 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 MEAF6Q9HAF1 191 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 IL1RL2Q9HB29 575 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 PROK2Q9HC23 129 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 PLSCR2Q9NRY7 297 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 THAP1Q9NVV9 213 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 MARCOQ9UEW3 520 aaPredicted RBP11.85□□□□□ -0.51
COL5A1-206ENST00000465877 ATP6V1HQ9UI12 483 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 SH3BGRL2Q9UJC5 107 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 BOKQ9UMX3 212 aaPredicted RBP11.85□□□□□ -0.51
COL5A1-206ENST00000465877 C19orf53Q9UNZ5 99 aaPredicted RBP11.85□□□□□ -0.51
COL5A1-206ENST00000465877 GPR55Q9Y2T6 319 aaPredicted RBP11.85□□□□□ -0.51
COL5A1-206ENST00000465877 LIPGQ9Y5X9 500 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.85□□□□□ -0.51
COL5A1-206ENST00000465877 ARHGAP21Q5T5U3 1957 aa11.85□□□□□ -0.51
COL5A1-206ENST00000465877 PHF3Q92576 2039 aaKnown RBP11.84□□□□□ -0.51
COL5A1-206ENST00000465877 ZNHIT1O43257 154 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 LRRTM2O43300 516 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 UGT2B11O75310 529 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 LDLRP01130 860 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 ABCB1P08183 1280 aaPredicted RBP11.84□□□□□ -0.51
COL5A1-206ENST00000465877 G6PDP11413 515 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 ABOP16442 354 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 NAGAP17050 411 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 EFNA1P20827 205 aaPredicted RBP11.84□□□□□ -0.51
COL5A1-206ENST00000465877 CA7P43166 264 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 PSPHP78330 225 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 PSG6Q00889 435 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 OCRLQ01968 901 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 EMX2Q04743 252 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 HYAL4Q2M3T9 481 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.84□□□□□ -0.51
COL5A1-206ENST00000465877 DESI1Q6ICB0 168 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 TMEM81Q6P7N7 255 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 RGS9BPQ6ZS82 235 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 SZRD1Q7Z422 152 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 FJX1Q86VR8 437 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 RIMKLAQ8IXN7 391 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 TMEM251Q8N6I4 163 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 GOLGA6L1Q8N7Z2 621 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 HGDQ93099 445 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 TMBIM1Q969X1 311 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 RILPQ96NA2 401 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 MS4A4EQ96PG1 132 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 OSBPL11Q9BXB4 747 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms