RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 UBE2FQ969M7 185 aa5.56□□□□□ -1.52
CLK1-207ENST00000461981 CPNE4Q96A23 557 aaPredicted RBP5.56□□□□□ -1.52
CLK1-207ENST00000461981 S100PBPQ96BU1 408 aa5.56□□□□□ -1.52
CLK1-207ENST00000461981 MRPS24Q96EL2 167 aaKnown RBP5.56□□□□□ -1.52
CLK1-207ENST00000461981 LIN37Q96GY3 246 aaPredicted RBP5.56□□□□□ -1.52
CLK1-207ENST00000461981 CAMK1GQ96NX5 476 aa5.56□□□□□ -1.52
CLK1-207ENST00000461981 CBWD1Q9BRT8 395 aa5.56□□□□□ -1.52
CLK1-207ENST00000461981 SUCNR1Q9BXA5 334 aa5.56□□□□□ -1.52
CLK1-207ENST00000461981 UGT2B28Q9BY64 529 aa5.56□□□□□ -1.52
CLK1-207ENST00000461981 DUSP21Q9H596 190 aa5.56□□□□□ -1.52
CLK1-207ENST00000461981 GAREM1Q9H706 876 aa5.56□□□□□ -1.52
CLK1-207ENST00000461981 KRT84Q9NSB2 600 aa5.56□□□□□ -1.52
CLK1-207ENST00000461981 MID2Q9UJV3 735 aa5.56□□□□□ -1.52
CLK1-207ENST00000461981 STAP1Q9ULZ2 295 aa5.56□□□□□ -1.52
CLK1-207ENST00000461981 PLXNA2O75051 1894 aa5.56□□□□□ -1.52
CLK1-207ENST00000461981 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 TCRBV5S2A0A599 114 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 SMIM30A4D0T7 59 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 BTBD17A6NE02 478 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 FABP12A6NFH5 140 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 TISP43B9A030 160 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 WASH3PC4AMC7 463 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 PSMD9O00233 223 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 AKR7A3O95154 331 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 PEX11BO96011 259 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 NMBP08949 121 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 CXCL3P19876 107 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 DNASE1P24855 282 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 TEAD1P28347 426 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 SPAM1P38567 509 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 PTGER3P43115 390 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 ASPAP45381 313 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 GSK3BP49841 420 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 CCR9P51686 369 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 ZXDBP98169 803 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 MVKQ03426 396 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 MXD1Q05195 221 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 PLA2G7Q13093 441 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 MAMLD1Q13495 774 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 FRG1Q14331 258 aaKnown RBP5.55□□□□□ -1.52
CLK1-207ENST00000461981 ZNF234Q14588 700 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 TAF1AQ15573 450 aaPredicted RBP5.55□□□□□ -1.52
CLK1-207ENST00000461981 AVPI1Q5T686 147 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 BSPRYQ5W0U4 402 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 TRIQKQ629K1 86 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 KIAA1161Q6NSJ0 714 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 KIAA1211LQ6NV74 962 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 NPNTQ6UXI9 565 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 SHFQ7M4L6 423 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 MCATQ8IVS2 390 aaKnown RBP5.55□□□□□ -1.52
CLK1-207ENST00000461981 TMEFF1Q8IYR6 380 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 PAPD5Q8NDF8 572 aaKnown RBP5.55□□□□□ -1.52
CLK1-207ENST00000461981 C19orf18Q8NEA5 215 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 OR11H7Q8NGC8 314 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 OR5B17Q8NGF7 314 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 DIRAS2Q96HU8 199 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 TMEM74Q96NL1 305 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 SERINC2Q96SA4 455 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 MED10Q9BTT4 135 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 DUSP26Q9BV47 211 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 HDAC8Q9BY41 377 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 SNTG1Q9NSN8 517 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 TMEM74BQ9NUR3 256 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 TREM2Q9NZC2 230 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 EXTL2Q9UBQ6 330 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 DNAJB11Q9UBS4 358 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 SPAARA0A1B0GVQ0 90 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 MARCH11A6NNE9 402 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 C1QTNF3-AMACRE9PGA6 284 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 PRAMEF26H0Y7S4 382 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 J3QKU1 62 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 PLRG1O43660 514 aaKnown RBP5.55□□□□□ -1.52
CLK1-207ENST00000461981 ICOSLGO75144 302 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 PRAMEF1O95521 474 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 PAK4O96013 591 aaPredicted RBP5.55□□□□□ -1.52
CLK1-207ENST00000461981 ITGAMP11215 1152 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 ANXA3P12429 323 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 MGAT1P26572 445 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 FABP9Q0Z7S8 132 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 DOC2AQ14183 400 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 NHLRC3Q5JS37 347 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 TEX30Q5JUR7 227 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 BICRALQ6AI39 1079 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 TCEAL6Q6IPX3 200 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 TIFABQ6ZNK6 161 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 SSX6Q7RTT6 188 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 SCD5Q86SK9 330 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 TMEM25Q86YD3 366 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 RFX6Q8HWS3 928 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 FUNDC1Q8IVP5 155 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 GHDCQ8N2G8 530 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 ZNF383Q8NA42 475 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 TMEM145Q8NBT3 493 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 OR4C6Q8NH72 309 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 OR10J5Q8NHC4 309 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 OR14A16Q8NHC5 309 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 ZDHHC1Q8WTX9 485 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 NAT6Q93015 286 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 PDLIM5Q96HC4 596 aaKnown RBP5.55□□□□□ -1.52
CLK1-207ENST00000461981 AMDHD1Q96NU7 426 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms