RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 RPL26P61254 145 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 TUBB4BP68371 445 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 CCL7P80098 99 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 DYNC1I2Q13409 638 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 C1orf61Q13536 156 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 DPYSQ14117 519 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 FCN2Q15485 313 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 DPYSL2Q16555 572 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 HADHQ16836 314 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 C14orf28Q4W4Y0 310 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 LRRC23Q53EV4 343 aaPredicted RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 LACTB2Q53H82 288 aaPredicted RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 LRRC73Q5JTD7 316 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 CCDC122Q5T0U0 273 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 MARC1Q5VT66 337 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 SPECC1LQ69YQ0 1117 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 RAET1GQ6H3X3 334 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 CYB5D1Q6P9G0 228 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 NRROSQ86YC3 692 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 CEP112Q8N8E3 955 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 THAP6Q8TBB0 222 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 TEKT4Q8WW24 435 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 GIMAP1Q8WWP7 306 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 SYN2Q92777 582 aaPredicted RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 TSACCQ96A04 125 aaPredicted RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 ZNF653Q96CK0 615 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 CATSPER2Q96P56 530 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 QRFPRQ96P65 431 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 NUDCD1Q96RS6 583 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 PCDHB18PQ96TA0 734 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 MGME1Q9BQP7 344 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 SNRNP25Q9BV90 132 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 RBM4Q9BWF3 364 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 C1QTNF5Q9BXJ0 243 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 POLR1EQ9GZS1 481 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 MMADHCQ9H3L0 296 aaPredicted RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 LRRN3Q9H3W5 708 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 RABEP2Q9H5N1 569 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 CNOT8Q9UFF9 292 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 PISDQ9UG56 409 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 MOSPD1Q9UJG1 213 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 RPL26L1Q9UNX3 145 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 AAR2Q9Y312 384 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 OR1A2Q9Y585 309 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 SEC16AO15027 2179 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 NOTCH3Q9UM47 2321 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 CSMD2Q7Z408 3487 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 RGSL1A5PLK6 1076 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 LRRC53A6NM62 1247 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 OR5K4A6NMS3 321 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 EFCAB7A8K855 629 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 TCP11X1B4DZS4 312 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 B4E171 279 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 GPR89AB7ZAQ6 455 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 RNF103O00237 685 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 TRAFD1O14545 582 aaPredicted RBP3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 VCYO14598 125 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 SPINT2O43291 252 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 DUX1O43812 170 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 LRCH4O75427 683 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 MTRF1O75570 445 aaKnown RBP3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 PGLSO95336 258 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 SERPING1P05155 500 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 TUBBP07437 444 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 GPR89BP0CG08 455 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 NR1D1P20393 614 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 ALDH4A1P30038 563 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 CSTF2P33240 577 aaKnown RBP eCLIP3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 TSPAN7P41732 249 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 PRKCIP41743 596 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 GPR1P46091 355 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 GNPDA1P46926 289 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 PPM1FP49593 454 aaPredicted RBP3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 NR0B1P51843 470 aaKnown RBP3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 SH3BGRP55822 239 aaPredicted RBP3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 ZBED6P86452 979 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 CDK3Q00526 305 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 MC1RQ01726 317 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 ZFP36L1Q07352 338 aaKnown RBP3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 FOXM1Q08050 763 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 NR1D2Q14995 579 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 PDK2Q15119 407 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 DECR1Q16698 335 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 GSTA3Q16772 222 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 TMEM30BQ3MIR4 351 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 RAB6CQ53S08 254 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 ODF2Q5BJF6 829 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 TPRG1LQ5T0D9 272 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 DCAF12Q5T6F0 453 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 SIGIRRQ6IA17 410 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 GALNT13Q8IUC8 556 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 ARHGAP12Q8IWW6 846 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 NIPA2Q8N8Q9 360 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 Q8N9G6 341 aaPredicted RBP3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 OR4D9Q8NGE8 314 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 OR10G6Q8NH81 332 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 EXD1Q8NHP7 514 aa3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 APOBEC4Q8WW27 367 aaKnown RBP3.87□□□□□ -1.79
GTF3C3-207ENST00000451088 OR1E3Q8WZA6 343 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms