RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 MMP21Q8N119 569 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 TMEM151AQ8N4L1 468 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 C1orf52Q8N6N3 182 aaKnown RBP18.9■□□□□ 0.62
CPNE1-219ENST00000440240 DCAKDQ8WVC6 231 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 IFT81Q8WYA0 676 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 DTNBP1Q96EV8 351 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 CNRIP1Q96F85 164 aaPredicted RBP18.9■□□□□ 0.62
CPNE1-219ENST00000440240 ZNF681Q96N22 645 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 FMO2Q99518 471 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 ACANP16112 2415 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 NIPBLQ6KC79 2804 aaeCLIP18.89■□□□□ 0.611e-8■□□□□ 10.5
CPNE1-219ENST00000440240 C2orf72A6NCS6 295 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 FRG2CA6NGY1 282 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 OR6C70A6NIJ9 312 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 ABCB7O75027 752 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 UGT2B11O75310 529 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 URI1O94763 535 aaPredicted RBP18.89■□□□□ 0.61
CPNE1-219ENST00000440240 OR4F21O95013 312 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 ESRRBO95718 433 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 SBK3P0C264 359 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 DRD2P14416 443 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 TAC1P20366 129 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 SOX18P35713 384 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 PTGDSP41222 190 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 DGKQP52824 942 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 TEX35Q5T0J7 233 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 DESI1Q6ICB0 168 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 SCIMPQ6UWF3 145 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 CAMKMTQ7Z624 323 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 MMGT1Q8N4V1 131 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 SIMC1Q8NDZ2 872 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 OR14L1PQ8NHC6 308 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 ERP27Q96DN0 273 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 ZFP3Q96NJ6 502 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 TM9SF2Q99805 663 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 GALNT9Q9HCQ5 603 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 SERHLQ9NQF3 203 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 JKAMPQ9P055 326 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 DMGDHQ9UI17 866 aaKnown RBP18.89■□□□□ 0.61
CPNE1-219ENST00000440240 MCM8Q9UJA3 840 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 ZNF225Q9UK10 706 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 UTS2RQ9UKP6 389 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 MAPRE3Q9UPY8 281 aa18.89■□□□□ 0.61
CPNE1-219ENST00000440240 GPR55Q9Y2T6 319 aaPredicted RBP18.89■□□□□ 0.61
CPNE1-219ENST00000440240 A0A087WUV0 522 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-219ENST00000440240 PRAMEF25A6NGN4 478 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 EEF1E1-BLOC1S5C9J1V9 151 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 MANBAO00462 879 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 EEF1E1O43324 174 aaKnown RBP18.88■□□□□ 0.61
CPNE1-219ENST00000440240 SUPT7LO94864 414 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 GOSR1O95249 250 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 TMIGD3P0DMS9 266 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-219ENST00000440240 PCSK2P16519 638 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 AGFG1P52594 562 aaKnown RBP18.88■□□□□ 0.61
CPNE1-219ENST00000440240 PSPHP78330 225 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 DUSP2Q05923 314 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 RASA2Q15283 850 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 KRTAP21-3Q3LHN1 58 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 CCDC116Q8IYX3 515 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 GBP7Q8N8V2 638 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-219ENST00000440240 WDSUB1Q8N9V3 476 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 ZNF675Q8TD23 568 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 MBD6Q96DN6 1003 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 COL21A1Q96P44 957 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 ALPK1Q96QP1 1244 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 HBEGFQ99075 208 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 OR2B2Q9GZK3 357 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 PFDN4Q9NQP4 134 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 EHD3Q9NZN3 535 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 PLEKHA6Q9Y2H5 1048 aa18.88■□□□□ 0.61
CPNE1-219ENST00000440240 ULK1O75385 1050 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 ERN1O75460 977 aaKnown RBP18.87■□□□□ 0.61
CPNE1-219ENST00000440240 REM1O75628 298 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 KLK2P20151 261 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 EEF1A1P68104 462 aaKnown RBP18.87■□□□□ 0.61
CPNE1-219ENST00000440240 MRPS35P82673 323 aaKnown RBP18.87■□□□□ 0.61
CPNE1-219ENST00000440240 HMGCS1Q01581 520 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 CSTF3Q12996 717 aaKnown RBP18.87■□□□□ 0.61
CPNE1-219ENST00000440240 LTB4RQ15722 352 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 EEF1A1P5Q5VTE0 462 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 FAM180BQ6P0A1 224 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 AAGABQ6PD74 315 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 IFNEQ86WN2 208 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 PLCZ1Q86YW0 608 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 TRIM42Q8IWZ5 723 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 CDYL2Q8N8U2 506 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 C9orf106Q8NAJ2 232 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 WNT2BQ93097 391 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 TMBIM1Q969X1 311 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 UCN2Q96RP3 112 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 TUBA1CQ9BQE3 449 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 SFXN3Q9BWM7 321 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 TAS2R10Q9NYW0 307 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 HEY2Q9UBP5 337 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 NFU1Q9UMS0 254 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 DLGAP4Q9Y2H0 992 aa18.87■□□□□ 0.61
CPNE1-219ENST00000440240 MED12Q93074 2177 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 GNG14A0A1W2PPG7 69 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 H0Y3Z8 333 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 RCBTB2O95199 551 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms