RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 RXFP3Q9NSD7 469 aa20.6■□□□□ 0.89
VSX1-205ENST00000429762 UBAP1Q9NZ09 502 aa20.6■□□□□ 0.89
VSX1-205ENST00000429762 SAMHD1Q9Y3Z3 626 aaKnown RBP20.6■□□□□ 0.89
VSX1-205ENST00000429762 NINQ8N4C6 2090 aa20.6■□□□□ 0.89
VSX1-205ENST00000429762 A8MUA0 341 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 D6RAR5 112 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 H0YJX3 145 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 HOXB6P17509 224 aaKnown RBP20.59■□□□□ 0.89
VSX1-205ENST00000429762 GRK6P43250 576 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 STT3AP46977 705 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 HSD17B7P56937 341 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 PWWP2BQ6NUJ5 590 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 CTRCQ99895 268 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 BCL2L10Q9HD36 194 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 MKLN1Q9UL63 735 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 CDC14AQ9UNH5 594 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 GXYLT2A0PJZ3 443 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 BLACEA4D250 179 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 ALOX5P09917 674 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 KCNJ5P48544 419 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 MAP4K2Q12851 820 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 PDK3Q15120 406 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 CCDC157Q569K6 752 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 HEPHL1Q6MZM0 1159 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 SHISA6Q6ZSJ9 500 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 KRT73Q86Y46 540 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 SVOPLQ8N434 492 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 METTL25Q8N6Q8 603 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 APOBEC4Q8WW27 367 aaKnown RBP20.59■□□□□ 0.89
VSX1-205ENST00000429762 CYGBQ8WWM9 190 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 ZNF300Q96RE9 604 aaPredicted RBP20.59■□□□□ 0.89
VSX1-205ENST00000429762 OSBPL11Q9BXB4 747 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 REEP1Q9H902 201 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 PNO1Q9NRX1 252 aaKnown RBP20.59■□□□□ 0.89
VSX1-205ENST00000429762 FBXO34Q9NWN3 711 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 SIDT1Q9NXL6 827 aaKnown RBP20.59■□□□□ 0.89
VSX1-205ENST00000429762 RHCGQ9UBD6 479 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 CTSFQ9UBX1 484 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 ERVK-19Q9WJR5 959 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 DTX4Q9Y2E6 619 aa20.59■□□□□ 0.89
VSX1-205ENST00000429762 ASCC3Q8N3C0 2202 aaKnown RBP20.58■□□□□ 0.89
VSX1-205ENST00000429762 M0R3H8 397 aa20.58■□□□□ 0.89
VSX1-205ENST00000429762 NTN3O00634 580 aaPredicted RBP20.58■□□□□ 0.89
VSX1-205ENST00000429762 DENRO43583 198 aaKnown RBP20.58■□□□□ 0.89
VSX1-205ENST00000429762 SERPINB7O75635 380 aa20.58■□□□□ 0.89
VSX1-205ENST00000429762 BMP10O95393 424 aa20.58■□□□□ 0.89
VSX1-205ENST00000429762 ALPLP05186 524 aa20.58■□□□□ 0.89
VSX1-205ENST00000429762 RNF144AP50876 292 aaPredicted RBP20.58■□□□□ 0.89
VSX1-205ENST00000429762 ALDH3A2P51648 485 aa20.58■□□□□ 0.89
VSX1-205ENST00000429762 SPIBQ01892 262 aa20.58■□□□□ 0.89
VSX1-205ENST00000429762 GANABQ14697 944 aaKnown RBP20.58■□□□□ 0.89
VSX1-205ENST00000429762 SHQ1Q6PI26 577 aaKnown RBP20.58■□□□□ 0.89
VSX1-205ENST00000429762 CARM1Q86X55 608 aa20.58■□□□□ 0.89
VSX1-205ENST00000429762 VRK2Q86Y07 508 aa20.58■□□□□ 0.89
VSX1-205ENST00000429762 OR52J3Q8NH60 311 aa20.58■□□□□ 0.89
VSX1-205ENST00000429762 PROX1Q92786 737 aa20.58■□□□□ 0.89
VSX1-205ENST00000429762 TRNT1Q96Q11 434 aaKnown RBP20.58■□□□□ 0.89
VSX1-205ENST00000429762 Q9H521 79 aa20.58■□□□□ 0.89
VSX1-205ENST00000429762 SLC22A11Q9NSA0 550 aa20.58■□□□□ 0.89
VSX1-205ENST00000429762 EXD2Q9NVH0 621 aa20.58■□□□□ 0.89
VSX1-205ENST00000429762 SMPD3Q9NY59 655 aaPredicted RBP20.58■□□□□ 0.89
VSX1-205ENST00000429762 RARRES3Q9UL19 164 aa20.58■□□□□ 0.89
VSX1-205ENST00000429762 ZNF451Q9Y4E5 1061 aa20.58■□□□□ 0.89
VSX1-205ENST00000429762 NUP210LQ5VU65 1888 aa20.58■□□□□ 0.89
VSX1-205ENST00000429762 SEC16AO15027 2179 aa20.58■□□□□ 0.88
VSX1-205ENST00000429762 A0A0G2JPF8 293 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 HNRNPCL2B2RXH8 293 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 HNRNPCL3B7ZW38 293 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 CLIC3O95833 236 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 EPPINO95925 133 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 HNRNPCL4P0DMR1 293 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 TNNI3P19429 210 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 GABRA3P34903 492 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 GNA13Q14344 377 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 FRRS1Q6ZNA5 592 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 COX15Q7KZN9 410 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 LAPTM4BQ86VI4 370 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 GPR151Q8TDV0 419 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 FBXL20Q96IG2 436 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 ADI1Q9BV57 179 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 PIGUQ9H490 435 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 THSD1Q9NS62 852 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 LIPT1Q9Y234 373 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 NPIPA5A0A0B4J1W7 369 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 DUXAA6NLW8 204 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 EFCAB7A8K855 629 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 NPIPA7E9PJI5 369 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 HS6ST1O60243 411 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 SCRG1O75711 98 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 SLITRK5O94991 958 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 IFNW1P05000 195 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 GNAO1P09471 354 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 NPIPA8P0DM63 369 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 DNAJA1P31689 397 aaKnown RBP20.57■□□□□ 0.88
VSX1-205ENST00000429762 CDH12P55289 794 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 HPCAP84074 193 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 PPP2R2BQ00005 443 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 EXOSC6Q5RKV6 272 aaKnown RBP20.57■□□□□ 0.88
VSX1-205ENST00000429762 FIGNL1Q6PIW4 674 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 COX18Q8N8Q8 333 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms