RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 CLDN3O15551 220 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 PAPSS1O43252 624 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 ACSL4O60488 711 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 CTSVO60911 334 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 NME6O75414 186 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 MED24O75448 989 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 GPC4O75487 556 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 NDUFS3O75489 264 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 CBR3O75828 277 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 MFN2O95140 757 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 LYPLA2O95372 231 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 OTCP00480 354 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 MT-ATP6P00846 226 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 KRT8P05787 483 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 HSPA8P11142 646 aaKnown RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 ODC1P11926 461 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 CYP11B1P15538 503 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 CDH2P19022 906 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 HOXA6P31267 233 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 SFNP31947 248 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 RPA3P35244 121 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 CHRNA7P36544 502 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC11A1P49279 550 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 SERPINB9P50453 376 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 STAT2P52630 851 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 BLVRAP53004 296 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 NAGLUP54802 743 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 F2RL1P55085 397 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 UCP2P55851 309 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 TAS2R40P59535 323 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 HSPA14Q0VDF9 509 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 NAB1Q13506 487 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 RFTN1Q14699 578 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 PDK3Q15120 406 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZMYND11Q15326 602 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 TMED2Q15363 201 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC1A5Q15758 541 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 Q3ZCU0 254 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 CBWD6Q4V339 395 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 CBWD3Q5JTY5 395 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 RARS2Q5T160 578 aaKnown RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 ATAD3BQ5T9A4 648 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 OGFRL1Q5TC84 451 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 PRAMEF20Q5VT98 475 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 C1orf146Q5VVC0 180 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 NSUN5P2Q63ZY6 315 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 FBXL22Q6P050 247 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 UGT2A3Q6UWM9 527 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 IZUMO2Q6UXV1 221 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 TIFABQ6ZNK6 161 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 C15orf39Q6ZRI6 1047 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 SEPT14Q6ZU15 432 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 SH2D5Q6ZV89 423 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 Q75L30 129 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 NIPA1Q7RTP0 329 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 GPR142Q7Z601 462 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 TMCO2Q7Z6W1 182 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 SYVN1Q86TM6 617 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 SETD3Q86TU7 594 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 TSPAN33Q86UF1 283 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 PHF13Q86YI8 300 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 ARHGAP12Q8IWW6 846 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 MCOLN2Q8IZK6 566 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 PDIK1LQ8N165 341 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 EMC1Q8N766 993 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 LPCAT1Q8NF37 534 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 OR10V1Q8NGI7 309 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 OR8J1Q8NGP2 316 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 CDC26Q8NHZ8 85 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 FNDC8Q8TC99 324 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 HM13Q8TCT9 377 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC26A7Q8TE54 656 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 ADAMTS16Q8TE57 1224 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 PYROXD1Q8WU10 500 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC38A5Q8WUX1 472 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC44A1Q8WWI5 657 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 ROBO4Q8WZ75 1007 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 TOP1MTQ969P6 601 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLAMF9Q96A28 289 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZNF524Q96C55 264 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 LGALS12Q96DT0 336 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 C17orf77Q96MU5 243 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 NECTIN4Q96NY8 510 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 ACCSQ96QU6 501 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 RIT2Q99578 217 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 PKP2Q99959 881 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC25A23Q9BV35 468 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 RBM4Q9BWF3 364 aaKnown RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 GON7Q9BXV9 100 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 FGFBP2Q9BYJ0 223 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZNF350Q9GZX5 532 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 TMEM117Q9H0C3 514 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 DEFB129Q9H1M3 183 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 LRRC40Q9H9A6 602 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 PLGRKTQ9HBL7 147 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLCO1B3Q9NPD5 702 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 UBE2TQ9NPD8 197 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 PRMT8Q9NR22 394 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 FAIMQ9NVQ4 179 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms