RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 SPRED3Q2MJR0 410 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 RBM20Q5T481 1227 aaKnown RBP7.06□□□□□ -1.28
SH3D19-203ENST00000409598 VWA5B1Q5TIE3 1220 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 GPR107Q5VW38 600 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 CLEC6AQ6EIG7 209 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 AMIGO2Q86SJ2 522 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 SLC15A3Q8IY34 581 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 FBXL14Q8N1E6 418 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 FBXW8Q8N3Y1 598 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 ZNF283Q8N7M2 679 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 NAT8LQ8N9F0 302 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 BOLLQ8N9W6 283 aaKnown RBP7.06□□□□□ -1.28
SH3D19-203ENST00000409598 HUS1BQ8NHY5 278 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 ZC3HAV1LQ96H79 300 aaKnown RBP7.06□□□□□ -1.28
SH3D19-203ENST00000409598 TRIB1Q96RU8 372 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 NPAS2Q99743 824 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 CNIH4Q9P003 139 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 SLC17A7Q9P2U7 560 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 LRRC30A6NM36 301 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 BLOC1S5-TXNDC5H3BN57 136 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 NRP2O60462 931 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 F10P00742 488 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 LCKP06239 509 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 ADORA3P0DMS8 318 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 PNMTP11086 282 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 HOXA6P31267 233 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 IDUAP35475 653 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 AQP4P55087 323 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 MYBPC3Q14896 1274 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 PCBP2Q15366 365 aaKnown RBP eCLIP7.06□□□□□ -1.281e-15■■■■■ 54.6
SH3D19-203ENST00000409598 ARL13AQ5H913 290 aaPredicted RBP7.06□□□□□ -1.28
SH3D19-203ENST00000409598 PRAMEF8Q5VWM4 474 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 PRAMEF7Q5VXH5 474 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 PGM2L1Q6PCE3 622 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 C5orf46Q6UWT4 87 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 ZDHHC24Q6UX98 284 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 CYP2R1Q6VVX0 501 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 C3P1Q6ZMU1 363 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 CHERPQ8IWX8 916 aaKnown RBP7.06□□□□□ -1.28
SH3D19-203ENST00000409598 MORN4Q8NDC4 146 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 MAGEE2Q8TD90 523 aaPredicted RBP7.06□□□□□ -1.28
SH3D19-203ENST00000409598 COQ8BQ96D53 544 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 CDK15Q96Q40 435 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 C9orf16Q9BUW7 83 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 POLDIP3Q9BY77 421 aaKnown RBP7.06□□□□□ -1.28
SH3D19-203ENST00000409598 SSU72Q9NP77 194 aaKnown RBP7.06□□□□□ -1.28
SH3D19-203ENST00000409598 ZNF223Q9UK11 482 aaPredicted RBP7.06□□□□□ -1.28
SH3D19-203ENST00000409598 LOC102725191A0A1B0GVB3 256 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 NSA2O95478 260 aaKnown RBP7.06□□□□□ -1.28
SH3D19-203ENST00000409598 SERPINA7P05543 415 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 BCHEP06276 602 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 GPIP06744 558 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 GSTT2P0CG29 244 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 GSTT2BP0CG30 244 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 TCF4P15884 667 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 AOAHP28039 575 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 EPHA3P29320 983 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 TTKP33981 857 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 CBX5P45973 191 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 CARD18P57730 90 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 PSME3P61289 254 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 TLE3Q04726 772 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 SNAPC1Q16533 368 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 HENMT1Q5T8I9 393 aaKnown RBP7.06□□□□□ -1.28
SH3D19-203ENST00000409598 METTL21CQ5VZV1 264 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 CARD17Q5XLA6 110 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 ARHGAP11AQ6P4F7 1023 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 ADGRD1Q6QNK2 874 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 TMEM107Q6UX40 140 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 CXXC5Q7LFL8 322 aaKnown RBP7.06□□□□□ -1.28
SH3D19-203ENST00000409598 ANKRD46Q86W74 232 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 SLC34A3Q8N130 599 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 COQ10AQ96MF6 247 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 DDA1Q9BW61 102 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 LHX9Q9NQ69 397 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 UBQLN4Q9NRR5 601 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 SMOXQ9NWM0 555 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 KLHL9Q9P2J3 617 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 ADAM29Q9UKF5 820 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 A8MT66 165 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 EFCAB9A8MZ26 197 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 PRR23D1E9PI22 279 aaPredicted RBP7.06□□□□□ -1.28
SH3D19-203ENST00000409598 PLIN3O60664 434 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 FABP3P05413 133 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 PRR23D2P0DMB1 279 aaPredicted RBP7.06□□□□□ -1.28
SH3D19-203ENST00000409598 ENPP1P22413 925 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 PEX2P28328 305 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 TSFMP43897 325 aaKnown RBP7.06□□□□□ -1.28
SH3D19-203ENST00000409598 ZNF140P52738 457 aaPredicted RBP7.06□□□□□ -1.28
SH3D19-203ENST00000409598 NPRL3Q12980 569 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 CAMK2DQ13557 499 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 OR1C1Q15619 314 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 NDUFA5Q16718 116 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 PHF12Q96QT6 1004 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 ARNT2Q9HBZ2 717 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 PNPLA3Q9NST1 481 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 TAS2R10Q9NYW0 307 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 SARDHQ9UL12 918 aa7.06□□□□□ -1.28
SH3D19-203ENST00000409598 LAMB2P55268 1798 aa7.05□□□□□ -1.28
SH3D19-203ENST00000409598 TRIM64A6NGJ6 449 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms