RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 RGS19P49795 217 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 PLA2G16P53816 162 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 IST1P53990 364 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 BASP1P80723 227 aaKnown RBP4.5□□□□□ -1.69
GABPB1-204ENST00000396464 CDH17Q12864 832 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 KRT81Q14533 505 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 GANABQ14697 944 aaKnown RBP4.5□□□□□ -1.69
GABPB1-204ENST00000396464 RTL6Q6ICC9 239 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 FAM173BQ6P4H8 233 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 DOK6Q6PKX4 331 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 DLK2Q6UY11 383 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 VPS36Q86VN1 386 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 LRRC6Q86X45 466 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 GPSM1Q86YR5 675 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 TBC1D10CQ8IV04 446 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 RNF149Q8NC42 400 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 ADAD2Q8NCV1 583 aaKnown RBP4.5□□□□□ -1.69
GABPB1-204ENST00000396464 CHDHQ8NE62 594 aaPredicted RBP4.5□□□□□ -1.69
GABPB1-204ENST00000396464 SDR9C7Q8NEX9 313 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 OR13J1Q8NGT2 312 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 NANPQ8TBE9 248 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 CCDC107Q8WV48 283 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 C10orf35Q96D05 121 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 S1PR3Q99500 378 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 COPS8Q99627 209 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 CMKLR1Q99788 373 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 POLE4Q9NR33 117 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 ADAM22Q9P0K1 906 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 MEMO1Q9Y316 297 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 ETV7Q9Y603 341 aa4.5□□□□□ -1.69
GABPB1-204ENST00000396464 DPPA5A6NC42 116 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 SERPINE3A8MV23 424 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 A8MXQ7 604 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 GPR137BO60478 399 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 PLAUP00749 431 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 VTNP04004 478 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 ATP1B2P14415 290 aaPredicted RBP4.49□□□□□ -1.69
GABPB1-204ENST00000396464 ZNF23P17027 643 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 MSH3P20585 1137 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 PPP2R1BP30154 601 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 MPLP40238 635 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 ACADSBP45954 432 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 VAMP7P51809 220 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 ATP1B3P54709 279 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 STX17P56962 302 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 PLP1P60201 277 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 B2MP61769 119 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 SARNPP82979 210 aaKnown RBP4.49□□□□□ -1.69
GABPB1-204ENST00000396464 GABPAQ06546 454 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 SIGLEC14Q08ET2 396 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 PEX6Q13608 980 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 GK3PQ14409 553 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 EFNB3Q15768 340 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 CDKN3Q16667 212 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 SLC22A10Q63ZE4 541 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 NADSYN1Q6IA69 706 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 TWF2Q6IBS0 349 aaKnown RBP4.49□□□□□ -1.69
GABPB1-204ENST00000396464 SNRNP48Q6IEG0 339 aaKnown RBP4.49□□□□□ -1.69
GABPB1-204ENST00000396464 CYP4V2Q6ZWL3 525 aaPredicted RBP4.49□□□□□ -1.69
GABPB1-204ENST00000396464 MON1BQ7L1V2 547 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 H2BFWTQ7Z2G1 175 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 PRUNE1Q86TP1 453 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 CDKL3Q8IVW4 592 aaPredicted RBP4.49□□□□□ -1.69
GABPB1-204ENST00000396464 TMEM99Q8N816 258 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 GATSQ8NAP1 163 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 MLKLQ8NB16 471 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 NOA1Q8NC60 698 aaKnown RBP4.49□□□□□ -1.69
GABPB1-204ENST00000396464 OR7G1Q8NGA0 311 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 OR10H4Q8NGA5 316 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 OR11H4Q8NGC9 324 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 OR51L1Q8NGJ5 315 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 OR4D5Q8NGN0 318 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 ZNF461Q8TAF7 563 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 FGFBP3Q8TAT2 258 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 RNF128Q8TEB7 428 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 RND1Q92730 232 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 PHF21AQ96BD5 680 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 Q96MF0 132 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 PELOQ9BRX2 385 aaKnown RBP4.49□□□□□ -1.69
GABPB1-204ENST00000396464 DPH7Q9BTV6 452 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 FUCA2Q9BTY2 467 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 TM6SF2Q9BZW4 377 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 DCLK3Q9C098 648 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 SDCBP2Q9H190 292 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 HIPK2Q9H2X6 1198 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 MOV10Q9HCE1 1003 aaKnown RBP4.49□□□□□ -1.69
GABPB1-204ENST00000396464 ACKR4Q9NPB9 350 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 ZNF302Q9NR11 478 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 ECHDC1Q9NTX5 307 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 RNF146Q9NTX7 359 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 C1orf123Q9NWV4 160 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 MS4A12Q9NXJ0 267 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 GNG12Q9UBI6 72 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 CYTH4Q9UIA0 394 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 ATPIF1Q9UII2 106 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 LAMP3Q9UQV4 416 aa4.49□□□□□ -1.69
GABPB1-204ENST00000396464 EXOGQ9Y2C4 368 aaKnown RBP4.49□□□□□ -1.69
GABPB1-204ENST00000396464 NEURL4Q96JN8 1562 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 TRBV11-1A0A0K0K1C0 115 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 ZNF840PA6NDX5 716 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms