RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 LANCL3Q6ZV70 420 aa17.33■□□□□ 0.36
CLN3-206ENST00000360019 ERMP1Q7Z2K6 904 aa17.33■□□□□ 0.36
CLN3-206ENST00000360019 METTL25Q8N6Q8 603 aa17.33■□□□□ 0.36
CLN3-206ENST00000360019 CDRT4Q8N9R6 151 aa17.33■□□□□ 0.36
CLN3-206ENST00000360019 HOXB13Q92826 284 aaPredicted RBP17.33■□□□□ 0.36
CLN3-206ENST00000360019 FKBP10Q96AY3 582 aa17.33■□□□□ 0.36
CLN3-206ENST00000360019 ZNF578Q96N58 590 aaPredicted RBP17.33■□□□□ 0.36
CLN3-206ENST00000360019 DTX4Q9Y2E6 619 aa17.33■□□□□ 0.36
CLN3-206ENST00000360019 SPAARA0A1B0GVQ0 90 aa17.32■□□□□ 0.36
CLN3-206ENST00000360019 IDSB3KWA1 339 aa17.32■□□□□ 0.36
CLN3-206ENST00000360019 HNRNPRO43390 633 aaKnown RBP17.32■□□□□ 0.36
CLN3-206ENST00000360019 ALBP02768 609 aa17.32■□□□□ 0.36
CLN3-206ENST00000360019 SEMG1P04279 462 aa17.32■□□□□ 0.36
CLN3-206ENST00000360019 FTH1P19P0C7X4 201 aa17.32■□□□□ 0.36
CLN3-206ENST00000360019 JMJD7P0C870 316 aa17.32■□□□□ 0.36
CLN3-206ENST00000360019 AGXTP21549 392 aa17.32■□□□□ 0.36
CLN3-206ENST00000360019 CRISP3P54108 245 aa17.32■□□□□ 0.36
CLN3-206ENST00000360019 ZNF155Q12901 538 aaPredicted RBP17.32■□□□□ 0.36
CLN3-206ENST00000360019 ELAVL1Q15717 326 aaKnown RBP17.32■□□□□ 0.36
CLN3-206ENST00000360019 ZCCHC12Q6PEW1 402 aa17.32■□□□□ 0.36
CLN3-206ENST00000360019 ZNF517Q6ZMY9 492 aaPredicted RBP17.32■□□□□ 0.36
CLN3-206ENST00000360019 PATL1Q86TB9 770 aaKnown RBP17.32■□□□□ 0.36
CLN3-206ENST00000360019 ZNF615Q8N8J6 731 aa17.32■□□□□ 0.36
CLN3-206ENST00000360019 POP5Q969H6 163 aaKnown RBP17.32■□□□□ 0.36
CLN3-206ENST00000360019 HSH2DQ96JZ2 352 aa17.32■□□□□ 0.36
CLN3-206ENST00000360019 RSPO3Q9BXY4 272 aaPredicted RBP17.32■□□□□ 0.36
CLN3-206ENST00000360019 PIGUQ9H490 435 aa17.32■□□□□ 0.36
CLN3-206ENST00000360019 MAGIXQ9H6Y5 334 aa17.32■□□□□ 0.36
CLN3-206ENST00000360019 FOLH1BQ9HBA9 442 aa17.32■□□□□ 0.36
CLN3-206ENST00000360019 GIN1Q9NXP7 522 aa17.32■□□□□ 0.36
CLN3-206ENST00000360019 ZNF451Q9Y4E5 1061 aa17.32■□□□□ 0.36
CLN3-206ENST00000360019 HEMK1Q9Y5R4 338 aaPredicted RBP17.32■□□□□ 0.36
CLN3-206ENST00000360019 CNOT1A5YKK6 2376 aaKnown RBP17.32■□□□□ 0.36
CLN3-206ENST00000360019 CCDC88CQ9P219 2028 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 CCDC187A0A096LP49 1063 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 PLD2O14939 933 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 PRAMEF2O60811 474 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 H6PDO95479 791 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 KLK3P07288 261 aaPredicted RBP17.31■□□□□ 0.36
CLN3-206ENST00000360019 GCKP35557 465 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 SELENOWP63302 87 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 ELOAQ14241 798 aaKnown RBP17.31■□□□□ 0.36
CLN3-206ENST00000360019 FAAH2Q6GMR7 532 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 AMIGO2Q86SJ2 522 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 ZNF321PQ8N8H1 164 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 GALNT6Q8NCL4 622 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 C7orf57Q8NEG2 295 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 MR1Q95460 341 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 SENP5Q96HI0 755 aaPredicted RBP17.31■□□□□ 0.36
CLN3-206ENST00000360019 FBXL20Q96IG2 436 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 TPD52L3Q96J77 140 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 VSTM2LQ96N03 204 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 TAAR9Q96RI9 348 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 MESP1Q9BRJ9 268 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 OR10A5Q9H207 317 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 SEMA6AQ9H2E6 1030 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 BCL2L10Q9HD36 194 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 DUSP22Q9NRW4 184 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 AGPAT4Q9NRZ5 378 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 ADPRHL2Q9NX46 363 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 LIPT1Q9Y234 373 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 PCDHGA8Q9Y5G5 932 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 CLCA3PQ9Y6N3 262 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 FAM149AA5PLN7 773 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 A8MVJ9 347 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 CASQ2O14958 399 aaPredicted RBP17.31■□□□□ 0.36
CLN3-206ENST00000360019 SUV39H1O43463 412 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 ZIC2O95409 532 aaPredicted RBP17.31■□□□□ 0.36
CLN3-206ENST00000360019 AGR2O95994 175 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 HEXBP07686 556 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 ALOX5P09917 674 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 CDK4P11802 303 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 PSG6Q00889 435 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 EIF3IQ13347 325 aaKnown RBP17.31■□□□□ 0.36
CLN3-206ENST00000360019 TRIP10Q15642 601 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 GPAT3Q53EU6 434 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 ATAD3BQ5T9A4 648 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 LPCAT4Q643R3 524 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 FAM198BQ6UWH4 519 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 C16orf62Q7Z3J2 963 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 SMYD1Q8NB12 490 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 C16orf52Q8NHV5 167 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 PIK3R3Q92569 461 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 TRNT1Q96Q11 434 aaKnown RBP17.31■□□□□ 0.36
CLN3-206ENST00000360019 STACQ99469 402 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 ZPBPQ9BS86 351 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 LMF2Q9BU23 707 aaKnown RBP17.31■□□□□ 0.36
CLN3-206ENST00000360019 DOHHQ9BU89 302 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 DDA1Q9BW61 102 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 SLC38A1Q9H2H9 487 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 EXD2Q9NVH0 621 aa17.31■□□□□ 0.36
CLN3-206ENST00000360019 STK17BO94768 372 aa17.3■□□□□ 0.36
CLN3-206ENST00000360019 NKX2-2O95096 273 aa17.3■□□□□ 0.36
CLN3-206ENST00000360019 MFN2O95140 757 aa17.3■□□□□ 0.36
CLN3-206ENST00000360019 DDAH2O95865 285 aa17.3■□□□□ 0.36
CLN3-206ENST00000360019 IGKV3-11P04433 115 aa17.3■□□□□ 0.36
CLN3-206ENST00000360019 FASP25445 335 aa17.3■□□□□ 0.36
CLN3-206ENST00000360019 PEX2P28328 305 aa17.3■□□□□ 0.36
CLN3-206ENST00000360019 MAGEA2P43356 314 aa17.3■□□□□ 0.36
CLN3-206ENST00000360019 GNA13Q14344 377 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms