RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 THAP4Q8WY91 577 aa18.32■□□□□ 0.52
CDK13-202ENST00000340829 CPPED1Q9BRF8 314 aaPredicted RBP18.32■□□□□ 0.52
CDK13-202ENST00000340829 C5orf51A6NDU8 294 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 SOX9P48436 509 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 CCBE1Q6UXH8 406 aaPredicted RBP18.31■□□□□ 0.52
CDK13-202ENST00000340829 GPAT4Q86UL3 456 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 CCDC36Q8IYA8 594 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 PNLDC1Q8NA58 520 aaKnown RBP18.31■□□□□ 0.52
CDK13-202ENST00000340829 OR52E2Q8NGJ4 325 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 OR4K13Q8NH42 304 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 C15orf40Q8WUR7 153 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 SAMD8Q96LT4 415 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 TUBB1Q9H4B7 451 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 MAU2Q9Y6X3 613 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 TRAPPC13A5PLN9 417 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 EEF1E1O43324 174 aaKnown RBP18.31■□□□□ 0.52
CDK13-202ENST00000340829 STOMP27105 288 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 CDKN2CP42773 168 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 PUS10Q3MIT2 529 aaKnown RBP18.31■□□□□ 0.52
CDK13-202ENST00000340829 TBRG1Q3YBR2 411 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 PAQR7Q86WK9 346 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 RFT1Q96AA3 541 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 METTL2AQ96IZ6 378 aaKnown RBP18.31■□□□□ 0.52
CDK13-202ENST00000340829 CMKLR1Q99788 373 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.31■□□□□ 0.52
CDK13-202ENST00000340829 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.31■□□□□ 0.52
CDK13-202ENST00000340829 LRRN3E7EW58 273 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 IMPA1P29218 277 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 FBXO42Q6P3S6 717 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 WDR53Q7Z5U6 358 aaPredicted RBP18.31■□□□□ 0.52
CDK13-202ENST00000340829 TMED4Q7Z7H5 227 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 MS4A4EQ96PG1 132 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 LRRN3Q9H3W5 708 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 CA14Q9ULX7 337 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 SDC3O75056 442 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 JRKO75564 520 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 ZNF432O94892 652 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 ABLIM3O94929 683 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 ADORA3P0DMS8 318 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 PGAM2P15259 253 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 HMGA1P17096 107 aaKnown RBP18.31■□□□□ 0.52
CDK13-202ENST00000340829 GGT2P36268 569 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 HOXC5Q00444 222 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 PRAMEF17Q5VTA0 474 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 WDR20Q8TBZ3 569 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 CREB3L4Q8TEY5 395 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 ZDHHC1Q8WTX9 485 aa18.31■□□□□ 0.52
CDK13-202ENST00000340829 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.3■□□□□ 0.52
CDK13-202ENST00000340829 ISPDA4D126 451 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 CYB5AP00167 134 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 CD97P48960 835 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 MAZP56270 477 aaKnown RBP18.3■□□□□ 0.52
CDK13-202ENST00000340829 APOFQ13790 326 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 ARHGAP19Q14CB8 494 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 ANKRD13BQ86YJ7 626 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 GPALPP1Q8IXQ4 340 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 ZBTB8BQ8NAP8 495 aaPredicted RBP18.3■□□□□ 0.52
CDK13-202ENST00000340829 CCDC107Q8WV48 283 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 DPH1Q9BZG8 443 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 PCDHGB6Q9Y5F9 930 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 FBLP22087 321 aaKnown RBP18.3■□□□□ 0.52
CDK13-202ENST00000340829 ANKK1Q8NFD2 765 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 TEX37Q96LM6 180 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 HIST1H2AAQ96QV6 131 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 C19orf25Q9UFG5 118 aaPredicted RBP18.3■□□□□ 0.52
CDK13-202ENST00000340829 ZNF639Q9UID6 485 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 SLC7A7Q9UM01 511 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 TRBV2A0A0J9YWF9 115 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 WRBO00258 174 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 TFAP2AP05549 437 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 ZBTB20Q9HC78 741 aaPredicted RBP18.3■□□□□ 0.52
CDK13-202ENST00000340829 METTL21EPA6NDL7 271 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 CDC40O60508 579 aaKnown RBP eCLIP18.3■□□□□ 0.52
CDK13-202ENST00000340829 ALPLP05186 524 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 CRHBPP24387 322 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 ARHGAP11AQ6P4F7 1023 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 FAM86B1Q8N7N1 296 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 SERINC2Q96SA4 455 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 RNF121Q9H920 327 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 NANSQ9NR45 359 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 ENPP5Q9UJA9 477 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 HSPB11Q9Y547 144 aa18.3■□□□□ 0.52
CDK13-202ENST00000340829 PPP5CP53041 499 aa18.29■□□□□ 0.52
CDK13-202ENST00000340829 TUBB3Q13509 450 aa18.29■□□□□ 0.52
CDK13-202ENST00000340829 C1orf189Q5VU69 101 aa18.29■□□□□ 0.52
CDK13-202ENST00000340829 ALG1LQ6GMV1 187 aa18.29■□□□□ 0.52
CDK13-202ENST00000340829 ZC3H14Q6PJT7 736 aaKnown RBP18.29■□□□□ 0.52
CDK13-202ENST00000340829 B3GNT7Q8NFL0 401 aa18.29■□□□□ 0.52
CDK13-202ENST00000340829 OR5T3Q8NGG3 340 aa18.29■□□□□ 0.52
CDK13-202ENST00000340829 LILRB3O75022 631 aa18.29■□□□□ 0.52
CDK13-202ENST00000340829 SOX30O94993 753 aa18.29■□□□□ 0.52
CDK13-202ENST00000340829 POLR2IP36954 125 aaKnown RBP18.29■□□□□ 0.52
CDK13-202ENST00000340829 EMX1Q04741 257 aaPredicted RBP18.29■□□□□ 0.52
CDK13-202ENST00000340829 SMN1Q16637 294 aaKnown RBP18.29■□□□□ 0.52
CDK13-202ENST00000340829 OR51L1Q8NGJ5 315 aa18.29■□□□□ 0.52
CDK13-202ENST00000340829 DAZLQ92904 295 aaKnown RBP18.29■□□□□ 0.52
CDK13-202ENST00000340829 ZNF559Q9BR84 538 aa18.29■□□□□ 0.52
CDK13-202ENST00000340829 NPIPA5A0A0B4J1W7 369 aa18.29■□□□□ 0.52
CDK13-202ENST00000340829 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.29■□□□□ 0.52
CDK13-202ENST00000340829 NPIPA7E9PJI5 369 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms