RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 RBMS1P29558 406 aaKnown RBP15.65■□□□□ 0.1
PTCH1-201ENST00000331920 CBSP35520 551 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 RPS26P62854 115 aaKnown RBP15.65■□□□□ 0.1
PTCH1-201ENST00000331920 MRPS34P82930 218 aaKnown RBP15.65■□□□□ 0.1
PTCH1-201ENST00000331920 MELKQ14680 651 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 KIAA0319Q5VV43 1072 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 KRTCAP2Q8N6L1 136 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 BCO2Q9BYV7 579 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 SOX17Q9H6I2 414 aaPredicted RBP15.65■□□□□ 0.1
PTCH1-201ENST00000331920 SLC22A5O76082 557 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 GPR143P51810 404 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 ACTC1P68032 377 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 ACTA1P68133 377 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 KLHL21Q9UJP4 597 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 SLC16A5O15375 505 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 RFPL2O75678 378 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 ALDOBP05062 364 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 GALTP07902 379 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 GAAP10253 952 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 OR4N5Q8IXE1 308 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 C11orf84Q9BUA3 381 aaPredicted RBP15.65■□□□□ 0.1
PTCH1-201ENST00000331920 TSPAN11A1L157 253 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 OR7A17O14581 309 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 ZNF763Q0D2J5 394 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 MOGQ16653 247 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 PDLIM3Q53GG5 364 aaPredicted RBP15.65■□□□□ 0.1
PTCH1-201ENST00000331920 RABL3Q5HYI8 236 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 WDR45BQ5MNZ6 344 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 MFSD5Q6N075 450 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 COQ10AQ96MF6 247 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 OSBPL7Q9BZF2 842 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 RPS10-NUDT3A0A1W2PQS6 291 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 D6RAR5 112 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 J3KR12 359 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 TRAF3IP2O43734 574 aaPredicted RBP15.65■□□□□ 0.1
PTCH1-201ENST00000331920 HOXA9P31269 272 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 RPS10P46783 165 aaKnown RBP15.65■□□□□ 0.1
PTCH1-201ENST00000331920 GCGRP47871 477 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 OLIG2Q13516 323 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 SYT14Q8NB59 555 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 FKBP10Q96AY3 582 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 CD300AQ9UGN4 299 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 DFNA5O60443 496 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 GLSO94925 669 aaPredicted RBP15.64■□□□□ 0.09
PTCH1-201ENST00000331920 DEFA4P12838 97 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 TYRP14679 529 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 UBE2G2P60604 165 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 TRAV18A0A075B6X5 111 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 ASGR2P07307 311 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 RFTN1Q14699 578 aaPredicted RBP15.64■□□□□ 0.09
PTCH1-201ENST00000331920 PTPRCAPQ14761 206 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 POU4F3Q15319 338 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 APOBEC3HQ6NTF7 200 aaKnown RBP15.64■□□□□ 0.09
PTCH1-201ENST00000331920 BRAT1Q6PJG6 821 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 NRROSQ86YC3 692 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 INTS12Q96CB8 462 aaKnown RBP15.64■□□□□ 0.09
PTCH1-201ENST00000331920 HRASLSQ9HDD0 168 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 ZMAT5Q9UDW3 170 aaKnown RBP15.64■□□□□ 0.09
PTCH1-201ENST00000331920 NENFQ9UMX5 172 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 A8MT66 165 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 BEST1O76090 585 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 CHRNEQ04844 493 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 BRICD5Q6PL45 260 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 RAB9BQ9NP90 201 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 ACTR3BQ9P1U1 418 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 PMM2O15305 246 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 ABOP16442 354 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 DEFA6Q01524 100 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 GRB7Q14451 532 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 ZNF542PQ5EBM4 170 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 BEST4Q8NFU0 473 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 OR4K13Q8NH42 304 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 ACOT11Q8WXI4 607 aaPredicted RBP15.64■□□□□ 0.09
PTCH1-201ENST00000331920 ZNF160Q9HCG1 818 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 STUB1Q9UNE7 303 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 F3P13726 295 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 FPR1P21462 350 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 ADARB1P78563 741 aaKnown RBP15.64■□□□□ 0.09
PTCH1-201ENST00000331920 SLC2A6Q9UGQ3 507 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.64■□□□□ 0.09
PTCH1-201ENST00000331920 OR10J4P0C629 311 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 RAB15P59190 212 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 HNRNPDQ14103 355 aaKnown RBP15.64■□□□□ 0.09
PTCH1-201ENST00000331920 CTC1Q2NKJ3 1217 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 PLCXD3Q63HM9 321 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 IL34Q6ZMJ4 242 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 ZNF836Q6ZNA1 936 aa15.64■□□□□ 0.09
PTCH1-201ENST00000331920 NKX1-2Q9UD57 310 aaPredicted RBP15.64■□□□□ 0.09
PTCH1-201ENST00000331920 SLC22A2O15244 555 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 CNTN5O94779 1100 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 CERS1P27544 350 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 TEAD2Q15562 447 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 FAM180BQ6P0A1 224 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 BANPQ8N9N5 519 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 RNF128Q8TEB7 428 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 REEP6Q96HR9 211 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 SEMA6CQ9H3T2 930 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 CREBZFQ9NS37 354 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 CA14Q9ULX7 337 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 AP1G1O43747 822 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms