RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Cacna1fQ9JIS7 1985 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Igkv5-43A0A0B4J1J2 115 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gm43796A0A0J9YV32 372 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Dlgap4B1AZP2 992 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ggta1P23336 394 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Mab21l2Q8BPP1 359 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 2410137M14RikQ9CWF0 162 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Acbd4E9Q289 327 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr6P34986 316 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Polr2iP60898 125 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 AbatP61922 500 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Glycam1Q02596 151 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Kcnk6Q3TBV4 313 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gm813Q3UWK9 176 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Fam189bQ5HZJ5 669 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Taar8aQ5QD07 344 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 P4ha2Q60716 537 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Rbbp4Q60972 425 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Oard1Q8R5F3 152 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr622Q8VGY7 317 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Zcchc14Q8VIG0 956 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Bcl7aQ9CXE2 210 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Rpl34Q9D1R9 117 aaKnown RBP14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Spata19Q9DAQ9 154 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Lrr1D3YY91 422 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Klrb1cP27814 223 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Folr1P35846 255 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Rph3aP47708 681 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tead3P70210 439 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Cep76Q0VEJ0 659 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ppp3r2Q63811 179 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 DbhQ64237 622 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tpgs2Q66JT5 296 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr1307Q7TQX1 312 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Timmdc1Q8BUY5 285 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr1033Q8VFK5 310 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Asb18Q8VHA6 467 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Amdhd1Q9DBA8 426 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tmprss6Q9DBI0 811 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Dock5B2RY04 1868 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr396-ps1A0A0U1RNF5 211 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Prdm14E9Q3T6 561 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tcea1P10711 301 aaKnown RBP14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Hnrnpa1P49312 320 aaKnown RBP14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Art5P70352 309 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tstd2Q3U269 495 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Nsg1Q62092 185 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ubtd2Q6PGH0 234 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Spag1Q80ZX8 901 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Dtd2Q8BHA3 168 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Acad8Q9D7B6 413 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 PnckQ9QYK9 343 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gm2022A0A1Y7VLT7 144 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 ChadlE9Q7T7 748 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ephb6O08644 1014 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Abcb1aP21447 1276 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Bcl6P41183 707 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 CntfP51642 198 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Arhgap9Q1HDU4 648 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ufsp2Q99K23 461 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 PpieQ9QZH3 301 aaKnown RBP14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Cytl1A1E5L0 139 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Fam46aD3Z5S8 447 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ap1arE9PYF7 298 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gm9493F6SVV1 192 aaKnown RBP14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Serpinf1P97298 417 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Kcnk12Q76M80 430 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Chpt1Q8C025 398 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Pxdc1Q8JZU6 231 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Pbx4Q99NE9 378 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Prmt1Q9JIF0 371 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 1810010D01RikA0A1L1SR87 51 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Scarb2O35114 478 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Psmd4O35226 376 aaKnown RBP14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 LckP06240 509 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 AasdhQ80WC9 1100 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Galnt12Q8BGT9 576 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Zcchc4Q8BKW4 512 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Memo1Q91VH6 297 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Cmss1Q9CZT6 276 aaKnown RBP14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Q9DAR0 182 aa14.8□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr675A0A1B0GSE1 317 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Cped1B2RX70 1026 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gpr3P35413 330 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Sez6l2Q4V9Z5 910 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Arhgef15Q5FWH6 849 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Slitrk5Q810B7 957 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Cox14Q8BH51 57 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ahsa1Q8BK64 338 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Spata2lQ8BNN1 426 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Faim2Q8K097 317 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 L3hypdhQ9CXA2 354 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Eef1e1Q9D1M4 174 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Slc39a5Q9D856 535 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ppm1dQ9QZ67 598 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gm12695A2AGB2 545 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ttll3A4Q9E5 927 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gm10800D3Z496 220 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 TspearJ3S6Y1 670 aa14.79□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tcf3P15806 651 aa14.79□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms