RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 MAGEB16A2A368 324 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 FAM149AA5PLN7 773 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 K7ERI5 159 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 OR7A17O14581 309 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 CHUKO15111 745 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 FIBPO43427 364 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 HTATSF1O43719 755 aaKnown RBP1.16□□□□□ -2.22
CCDC93-209ENST00000488908 APOA4P06727 396 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 LDHCP07864 332 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 ZFYP08048 801 aaPredicted RBP1.16□□□□□ -2.22
CCDC93-209ENST00000488908 C8orf89P0DMQ9 161 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 CASTP20810 708 aaKnown RBP1.16□□□□□ -2.22
CCDC93-209ENST00000488908 IGHV1-2P23083 117 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 CCND3P30281 292 aaPredicted RBP1.16□□□□□ -2.22
CCDC93-209ENST00000488908 PRKCIP41743 596 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 MTIF2P46199 727 aaKnown RBP1.16□□□□□ -2.22
CCDC93-209ENST00000488908 NUCB1Q02818 461 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 SLC34A1Q06495 639 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 HSPA14Q0VDF9 509 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 TFCP2Q12800 502 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 KRT31Q15323 416 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 TOMM20Q15388 145 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 SPHARQ15513 63 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 LRRC38Q5VT99 294 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 Q5W150 140 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 C16orf54Q6UWD8 224 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 PET117Q6UWS5 81 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 ZNF836Q6ZNA1 936 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 MSANTD1Q6ZTZ1 278 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 ERICH1Q86X53 443 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 THNSL1Q8IYQ7 743 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.16□□□□□ -2.22
CCDC93-209ENST00000488908 PRCCQ92733 491 aaPredicted RBP1.16□□□□□ -2.22
CCDC93-209ENST00000488908 PCED1BQ96HM7 432 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 GUCD1Q96NT3 240 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 PRAM1Q96QH2 718 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 INTS14Q96SY0 518 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 S1PR3Q99500 378 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 AP1M1Q9BXS5 423 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 OR51J1Q9H342 316 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 ZDHHC4Q9NPG8 344 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 TMEM161AQ9NX61 479 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 CHCHD3Q9NX63 227 aaKnown RBP1.16□□□□□ -2.22
CCDC93-209ENST00000488908 VPS18Q9P253 973 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 ATG4BQ9Y4P1 393 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 OR1A2Q9Y585 309 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 A0A087X0K7 114 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 TRAV34A0A0B4J273 112 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 OOEPA6NGQ2 149 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 SDR42E2A6NKP2 422 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 MEI4A8MW99 385 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 SLU7O95391 586 aaKnown RBP1.15□□□□□ -2.23
CCDC93-209ENST00000488908 ALPIP09923 528 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 H2AFZP0C0S5 128 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 CT45A8P0DMV1 189 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 CT45A9P0DMV2 189 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 MBL2P11226 248 aaPredicted RBP1.15□□□□□ -2.23
CCDC93-209ENST00000488908 IGFBP5P24593 272 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 GJB2P29033 226 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 GP5P40197 560 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 FRKP42685 505 aaPredicted RBP1.15□□□□□ -2.23
CCDC93-209ENST00000488908 ALDH3B2P48448 385 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 TIMM10P62072 90 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 NFE2L1Q14494 772 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 P2RY14Q15391 338 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 OR1C1Q15619 314 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 HAGHQ16775 308 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 CT45A2Q5DJT8 189 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 DCAF12Q5T6F0 453 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 SEL1L2Q5TEA6 688 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 TAF3Q5VWG9 929 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 RHBDD2Q6NTF9 364 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 SIGLEC15Q6ZMC9 328 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 STOX1Q6ZVD7 989 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 SIAH3Q8IW03 269 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 KLHL7Q8IXQ5 586 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 KLHDC8AQ8IYD2 350 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 BLOC1S5Q8TDH9 187 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 SAP25Q8TEE9 199 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 CDKN2AIPNLQ96HQ2 116 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 ZNF559Q9BR84 538 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 NUSAP1Q9BXS6 441 aaKnown RBP1.15□□□□□ -2.23
CCDC93-209ENST00000488908 EDEM3Q9BZQ6 932 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 NAPBQ9H115 298 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 GLIPR2Q9H4G4 154 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 SRD5A3Q9H8P0 318 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 GDF3Q9NR23 364 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 NFKBIL1Q9UBC1 381 aaPredicted RBP1.15□□□□□ -2.23
CCDC93-209ENST00000488908 FBXL5Q9UKA1 691 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 ITM2BQ9Y287 266 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 RNF115Q9Y4L5 304 aa1.15□□□□□ -2.23
CCDC93-209ENST00000488908 FGD5Q6ZNL6 1462 aa1.14□□□□□ -2.23
CCDC93-209ENST00000488908 PARD3Q8TEW0 1356 aa1.14□□□□□ -2.23
CCDC93-209ENST00000488908 A0A0U1RQS6 177 aa1.14□□□□□ -2.23
CCDC93-209ENST00000488908 H7C0S8 307 aa1.14□□□□□ -2.23
CCDC93-209ENST00000488908 LCMT2O60294 686 aaKnown RBP1.14□□□□□ -2.23
CCDC93-209ENST00000488908 TSPAN2O60636 221 aa1.14□□□□□ -2.23
CCDC93-209ENST00000488908 ATP9AO75110 1047 aa1.14□□□□□ -2.23
CCDC93-209ENST00000488908 TBCAO75347 108 aaKnown RBP1.14□□□□□ -2.23
CCDC93-209ENST00000488908 FCER2P06734 321 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms