RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 DDX28Q9NUL7 540 aaKnown RBP3.07□□□□□ -1.92
AC003001.1-201ENST00000443247 DNAJC11Q9NVH1 559 aa3.07□□□□□ -1.92
AC003001.1-201ENST00000443247 RAI14Q9P0K7 980 aa3.07□□□□□ -1.92
AC003001.1-201ENST00000443247 CIDEBQ9UHD4 219 aa3.07□□□□□ -1.92
AC003001.1-201ENST00000443247 ATG4BQ9Y4P1 393 aa3.07□□□□□ -1.92
AC003001.1-201ENST00000443247 AFF2P51816 1311 aa3.07□□□□□ -1.92
AC003001.1-201ENST00000443247 ATP10BO94823 1461 aa3.07□□□□□ -1.92
AC003001.1-201ENST00000443247 LRRC9Q6ZRR7 1453 aa3.07□□□□□ -1.92
AC003001.1-201ENST00000443247 LRRC7Q96NW7 1537 aa3.07□□□□□ -1.92
AC003001.1-201ENST00000443247 FAM135AQ9P2D6 1515 aa3.07□□□□□ -1.92
AC003001.1-201ENST00000443247 SHPRHQ149N8 1683 aa3.07□□□□□ -1.92
AC003001.1-201ENST00000443247 ROBO1Q9Y6N7 1651 aa3.07□□□□□ -1.92
AC003001.1-201ENST00000443247 CDC42BPBQ9Y5S2 1711 aa3.07□□□□□ -1.92
AC003001.1-201ENST00000443247 KIDINS220Q9ULH0 1771 aa3.07□□□□□ -1.92
AC003001.1-201ENST00000443247 IGHV3-35A0A0C4DH35 117 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 HDAC3O15379 428 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 GPAA1O43292 621 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 PLXNC1O60486 1568 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 NUDT14O95848 222 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 IGHV3-9P01782 118 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 SNRPCP09234 159 aaKnown RBP3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 SLC35E2P0CK97 266 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 UROSP10746 265 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 CYP3A5P20815 502 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 ABCC1P33527 1531 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 HSPA1LP34931 641 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 TRIM23P36406 574 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 CDKL1Q00532 357 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 ROR1Q01973 937 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 ARHGAP5Q13017 1502 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 KLF5Q13887 457 aaPredicted RBP3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 ZC3H13Q5T200 1668 aaKnown RBP3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 C11orf88Q6PI97 169 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 Q6ZVH6 145 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 PIWIL3Q7Z3Z3 882 aaKnown RBP3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 GPR142Q7Z601 462 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 UBQLNLQ8IYU4 475 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 LINC00518Q8N0U6 118 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 SIDT2Q8NBJ9 832 aaKnown RBP3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 GDAP1Q8TB36 358 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 NUS1Q96E22 293 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 LINC00167Q96N53 147 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 GANQ9H2C0 597 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 DCLRE1BQ9H816 532 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 SHANK2Q9UPX8 1470 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 MOKQ9UQ07 419 aa3.06□□□□□ -1.92
AC003001.1-201ENST00000443247 CDC42BPAQ5VT25 1732 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 INO80Q9ULG1 1556 aaPredicted RBP3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 A2ML1A8K2U0 1454 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 NUP153P49790 1475 aaKnown RBP3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 KIF7Q2M1P5 1343 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 RPGRIP1LQ68CZ1 1315 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 H0Y9J4 135 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 CACNB4O00305 520 aaPredicted RBP3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 CDX4O14627 284 aaPredicted RBP3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 SLC7A4O43246 635 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 GJB5O95377 273 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 LAMP1P11279 417 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 SMSP52788 366 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 STX1BP61266 288 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 RPS4XP62701 263 aaKnown RBP3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 MSLNQ13421 630 aaPredicted RBP3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 RCN2Q14257 317 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 GK2Q14410 553 aaPredicted RBP3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 KRT31Q15323 416 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 TGIF1Q15583 401 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 FUT11Q495W5 492 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 C9orf129Q5T035 196 aaKnown RBP3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 CDC42EP5Q6NZY7 148 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 C2orf66Q6UXQ4 117 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 PRSS48Q7RTY5 328 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 LUZP1Q86V48 1076 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 RDH11Q8TC12 318 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 C19orf43Q9BQ61 176 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 JPH2Q9BR39 696 aaPredicted RBP3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 IKZF5Q9H5V7 419 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 PRO0461Q9UI25 63 aa3.05□□□□□ -1.92
AC003001.1-201ENST00000443247 CDK12Q9NYV4 1490 aaPredicted RBP3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 MLH3Q9UHC1 1453 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 SCAPERQ9BY12 1400 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 A0A0A6YYD4 124 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 SMIM30A4D0T7 59 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 A8MX80 341 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 SH2D1BO14796 132 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 REC8O95072 547 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 DUSP14O95147 198 aaKnown RBP3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 TGDSO95455 350 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 OAS1P00973 400 aaKnown RBP3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 PRKAR2BP31323 418 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 CTNNB1P35222 781 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 TNNT3P45378 269 aaPredicted RBP3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 ERVPABLB-1P60509 514 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 HERV-K104P63124 156 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 PRKCEQ02156 737 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 KIAA0040Q15053 153 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 HAGHQ16775 308 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 C2orf83Q53S99 150 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 MS4A13Q5J8X5 152 aa3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 TCHHL1Q5QJ38 904 aaPredicted RBP3.04□□□□□ -1.92
AC003001.1-201ENST00000443247 TAF3Q5VWG9 929 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms