RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 HCN1O60741 890 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 EPHX1P07099 455 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 SDC2P34741 201 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 ELAVL3Q14576 367 aaKnown RBP16.92■□□□□ 0.3
PHF1-201ENST00000374512 TMEM52BQ4KMG9 183 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 ZNF628Q5EBL2 1059 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 TMEM240Q5SV17 173 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 ZNF697Q5TEC3 545 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 SLC27A4Q6P1M0 643 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 ZNF730Q6ZMV8 503 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 IQCHQ86VS3 1027 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 SUN3Q8TAQ9 357 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 SFXN5Q8TD22 340 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 BADQ92934 168 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 FRMD6Q96NE9 622 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 SLC38A2Q96QD8 506 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 WFDC6Q9BQY6 131 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 A0A0G2JPF8 293 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 HNRNPCL2B2RXH8 293 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 HNRNPCL3B7ZW38 293 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 TMPRSS11DO60235 418 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 HLA-DQB1P01920 261 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 YES1P07947 543 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 HNRNPCL4P0DMR1 293 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 HLA-DMAP28067 261 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 FAM46CQ5VWP2 391 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 GALNT12Q8IXK2 581 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 ETFBKMTQ8IXQ9 262 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 PSD4Q8NDX1 1056 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 TEX47Q8TBZ9 253 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 GNPDA2Q8TDQ7 276 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 C1GALT1C1Q96EU7 318 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 AMDHD1Q96NU7 426 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 KATNB1Q9BVA0 655 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 FAIM2Q9BWQ8 316 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 PINK1Q9BXM7 581 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 SLA2Q9H6Q3 261 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 RNF121Q9H920 327 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 PLAGL1Q9UM63 463 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 RWDD3Q9Y3V2 267 aa16.92■□□□□ 0.3
PHF1-201ENST00000374512 DNMT3AQ9Y6K1 912 aaPredicted RBP16.92■□□□□ 0.3
PHF1-201ENST00000374512 FAM25AB3EWG3 89 aa16.91■□□□□ 0.3
PHF1-201ENST00000374512 FAM25CB3EWG5 89 aa16.91■□□□□ 0.3
PHF1-201ENST00000374512 FAM25GB3EWG6 89 aa16.91■□□□□ 0.3
PHF1-201ENST00000374512 B4DXG7 233 aa16.91■□□□□ 0.3
PHF1-201ENST00000374512 M0R3H8 397 aa16.91■□□□□ 0.3
PHF1-201ENST00000374512 TRIM3O75382 744 aaPredicted RBP16.91■□□□□ 0.3
PHF1-201ENST00000374512 CLEC3AO75596 197 aa16.91■□□□□ 0.3
PHF1-201ENST00000374512 MYL9P24844 172 aa16.91■□□□□ 0.3
PHF1-201ENST00000374512 GPC1P35052 558 aa16.91■□□□□ 0.3
PHF1-201ENST00000374512 MTNR1AP48039 350 aa16.91■□□□□ 0.3
PHF1-201ENST00000374512 OR4C11Q6IEV9 310 aa16.91■□□□□ 0.3
PHF1-201ENST00000374512 ERN2Q76MJ5 926 aaKnown RBP16.91■□□□□ 0.3
PHF1-201ENST00000374512 MOAP1Q96BY2 351 aa16.91■□□□□ 0.3
PHF1-201ENST00000374512 RNFT2Q96EX2 444 aa16.91■□□□□ 0.3
PHF1-201ENST00000374512 C11orf54Q9H0W9 315 aaPredicted RBP16.91■□□□□ 0.3
PHF1-201ENST00000374512 TRPC4Q9UBN4 977 aa16.91■□□□□ 0.3
PHF1-201ENST00000374512 NOX1Q9Y5S8 564 aa16.91■□□□□ 0.3
PHF1-201ENST00000374512 TRDV1A0A1B0GX56 115 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 SYT5O00445 386 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 PROM1O43490 865 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 MESP2Q0VG99 397 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 CAMK1Q14012 370 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 TAB1Q15750 504 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 FLYWCH1Q4VC44 716 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 CRTC2Q53ET0 693 aaPredicted RBP16.9■□□□□ 0.3
PHF1-201ENST00000374512 GPAT3Q53EU6 434 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 PYDC2Q56P42 97 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 C6orf183Q5T699 404 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 LCN1P1Q5VSP4 162 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 PSRC1Q6PGN9 363 aaPredicted RBP16.9■□□□□ 0.3
PHF1-201ENST00000374512 C2orf73Q8N5S3 287 aaPredicted RBP16.9■□□□□ 0.3
PHF1-201ENST00000374512 TTLQ8NG68 377 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 OR6T1Q8NGN1 323 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 RFKQ969G6 155 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 ZC3HAV1LQ96H79 300 aaKnown RBP16.9■□□□□ 0.3
PHF1-201ENST00000374512 COX14Q96I36 57 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 GDF15Q99988 308 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 ARHGAP9Q9BRR9 750 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 GLIPR2Q9H4G4 154 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 ANKRD19PQ9H560 264 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 SLC35C2Q9NQQ7 365 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 ZCCHC3Q9NUD5 404 aaKnown RBP16.9■□□□□ 0.3
PHF1-201ENST00000374512 CUEDC1Q9NWM3 386 aaPredicted RBP16.9■□□□□ 0.3
PHF1-201ENST00000374512 TEX10Q9NXF1 929 aaPredicted RBP16.9■□□□□ 0.3
PHF1-201ENST00000374512 C5AR2Q9P296 337 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 PRKAG2Q9UGJ0 569 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 LAMA2P24043 3122 aaKnown RBP16.9■□□□□ 0.3
PHF1-201ENST00000374512 A0A0A6YYD5 115 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 KDM4EB2RXH2 506 aaPredicted RBP16.9■□□□□ 0.3
PHF1-201ENST00000374512 CPN2P22792 545 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 CFL1P23528 166 aaKnown RBP16.9■□□□□ 0.3
PHF1-201ENST00000374512 NTSP30990 170 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 TGM4P49221 684 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 TMEM35AQ53FP2 167 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 ADAMTSL4Q6UY14 1074 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 UBE3DQ7Z6J8 389 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 NOXA1Q86UR1 476 aa16.9■□□□□ 0.3
PHF1-201ENST00000374512 LINC01553A4QN01 128 aa16.89■□□□□ 0.29
PHF1-201ENST00000374512 CLEC2LP0C7M8 214 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms