RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 SAMD4AQ9UPU9 718 aaKnown RBP8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 POLEQ07864 2286 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 ARPC4-TTLL3A0A0A6YYG9 625 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 TRAV20A0A0B4J274 112 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 A0A1W2PRG6 482 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 CLIC1O00299 241 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 CCL16O15467 120 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 MMP20O60882 483 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 H2AFB1P0C5Y9 115 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 H2AFB2P0C5Z0 115 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 GPX2P18283 190 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 SDC1P18827 310 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 DGKAP23743 735 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 MAT2AP31153 395 aaKnown RBP8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 KIAA1024LP59773 190 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 DEFB115Q30KQ5 88 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 Q6ZTK2 550 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 NLRC3Q7RTR2 1065 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 TRIM46Q7Z4K8 759 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 TMEM173Q86WV6 379 aaPredicted RBP8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 IFNL1Q8IU54 200 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 LILRA3Q8N6C8 439 aaPredicted RBP8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 C1orf52Q8N6N3 182 aaKnown RBP8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 ARIH2OSQ8N7S6 290 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 MRPS31Q92665 395 aaKnown RBP8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 ZSWIM3Q96MP5 696 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 POPDC3Q9HBV1 291 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 CA10Q9NS85 328 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 TVP23BQ9NYZ1 205 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 FNIP2Q9P278 1114 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 PCDHGB7Q9Y5F8 929 aa8.28□□□□□ -1.08
SMARCA1-203ENST00000371123 PLXNB3Q9ULL4 1909 aa8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 TNFRSF11BO00300 401 aa8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 IL1AP01583 271 aa8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 VIPR1P32241 457 aa8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 CCR6P51684 374 aa8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 CSTF3Q12996 717 aaKnown RBP8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 RBMS2Q15434 407 aaKnown RBP8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 ZNF792Q3KQV3 632 aa8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 RTP2Q5QGT7 225 aa8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 SLC6A19Q695T7 634 aa8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 CXorf57Q6NSI4 855 aaKnown RBP8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 CLDN22Q8N7P3 220 aa8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 OR1S1Q8NH92 325 aa8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 PIH1D2Q8WWB5 315 aa8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 NFKBIZQ9BYH8 718 aa8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 EMC7Q9NPA0 242 aa8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 NUDT15Q9NV35 164 aa8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 LYARQ9NX58 379 aaKnown RBP8.27□□□□□ -1.08
SMARCA1-203ENST00000371123 CHD5Q8TDI0 1954 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 PRAMEF33A0A0G2JMD5 474 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 F8W036 122 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 PRAMEF10O60809 474 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 CCNB2O95067 398 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 LRG1P02750 347 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 SULT1A3P0DMM9 295 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 SULT1A4P0DMN0 295 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 MC1RQ01726 317 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 FGL2Q14314 439 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 UPP1Q16831 310 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 HFEQ30201 348 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 ZNF528Q3MIS6 628 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 PABPC1L2AQ5JQF8 200 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 POMZP3Q6PJE2 187 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 ADGRF3Q8IZF5 1079 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 APCDD1Q8J025 514 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 LGI4Q8N135 537 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 PHOSPHO2Q8TCD6 241 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 THAP4Q8WY91 577 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 KIAA1143Q96AT1 154 aaPredicted RBP8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 CREB3L1Q96BA8 519 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 EID2BQ96D98 161 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 ABHD1Q96SE0 405 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 ZNF649Q9BS31 505 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 TRIM62Q9BVG3 475 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 RSPH9Q9H1X1 276 aaPredicted RBP8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 ZNF768Q9H5H4 540 aaKnown RBP8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 ASF1AQ9Y294 204 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 NCKAP1Q9Y2A7 1128 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 IRAK3Q9Y616 596 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 NCOR1O75376 2440 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 DPM1O60762 260 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 PDYNP01213 254 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 NUP62P37198 522 aaPredicted RBP8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 ZNF140P52738 457 aaPredicted RBP8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 PRSS53Q2L4Q9 553 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 GPR33Q49SQ1 333 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 FUT10Q6P4F1 479 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 ADGRD2Q7Z7M1 963 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 HUS1BQ8NHY5 278 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 TMEM163Q8TC26 289 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 CHTF18Q8WVB6 975 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 PPP3R2Q96LZ3 170 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 TRIB3Q96RU7 358 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 SLC22A12Q96S37 553 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 ADAT1Q9BUB4 502 aaKnown RBP8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 STOML2Q9UJZ1 356 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 PRSS21Q9Y6M0 314 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 SPTA1P02549 2419 aa8.27□□□□□ -1.09
SMARCA1-203ENST00000371123 MEIKINA0A087WXM9 373 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms