RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 LRIG1Q96JA1 1093 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 OR52B2Q96RD2 323 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 MEPEQ9NQ76 525 aaPredicted RBP15.67■□□□□ 0.1
PTCH1-201ENST00000331920 VSX1Q9NZR4 365 aaPredicted RBP15.67■□□□□ 0.1
PTCH1-201ENST00000331920 IRS2Q9Y4H2 1338 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 HPSE2Q8WWQ2 592 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 CCDC106Q9BWC9 280 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 PDE4DIPQ5VU43 2346 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 TCRBV21S2A2A0A5A6 115 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 NXPH3O95157 252 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 ARRB1P49407 418 aaPredicted RBP15.67■□□□□ 0.1
PTCH1-201ENST00000331920 NOGQ13253 232 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 SLC36A3Q495N2 470 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 RBMXL1Q96E39 390 aaKnown RBP15.67■□□□□ 0.1
PTCH1-201ENST00000331920 ZIM2Q9NZV7 527 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 COL20A1Q9P218 1284 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 TUSC2O75896 110 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 GALNT1Q10472 559 aaPredicted RBP15.67■□□□□ 0.1
PTCH1-201ENST00000331920 IL17AQ16552 155 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 ZNF776Q68DI1 518 aaPredicted RBP15.67■□□□□ 0.1
PTCH1-201ENST00000331920 DEDD2Q8WXF8 326 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 FBXL18Q96ME1 805 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 SACM1LQ9NTJ5 587 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 COL1A2P08123 1366 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 CBX7O95931 251 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 CBR1P16152 277 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 ANXA7P20073 488 aaKnown RBP15.67■□□□□ 0.1
PTCH1-201ENST00000331920 RAB35Q15286 201 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 SPANXN4Q5MJ08 99 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 CPNE8Q86YQ8 564 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 SCLYQ96I15 445 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 TERTO14746 1132 aaKnown RBP15.66■□□□□ 0.1
PTCH1-201ENST00000331920 KIAA0513O60268 411 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 SERPINA5P05154 406 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 CNEP1R1Q8N9A8 125 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 C3orf49Q96BT1 292 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 ABCG5Q9H222 651 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 SDK1Q7Z5N4 2213 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 HOXD11P31277 338 aaPredicted RBP15.66■□□□□ 0.1
PTCH1-201ENST00000331920 RPL23AP62750 156 aaKnown RBP15.66■□□□□ 0.1
PTCH1-201ENST00000331920 RBMXL3Q8N7X1 1067 aaKnown RBP15.66■□□□□ 0.1
PTCH1-201ENST00000331920 APMAPQ9HDC9 416 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 UQCRC2P22695 453 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 LILRA4P59901 499 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.66■□□□□ 0.1
PTCH1-201ENST00000331920 TANGO2Q6ICL3 276 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 SMPDL3AQ92484 453 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 PATZ1Q9HBE1 687 aaKnown RBP15.66■□□□□ 0.1
PTCH1-201ENST00000331920 ACKR4Q9NPB9 350 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 PRODH2Q9UF12 536 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 STXBP5LQ9Y2K9 1186 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 GSK3BP49841 420 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 GBX1Q14549 363 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 BEX5Q5H9J7 111 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 OR14J1Q9UGF5 321 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 GPR34Q9UPC5 381 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 PCDHAC2Q9Y5I4 1007 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 PLSCR5A0PG75 271 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 B4GALT4O60513 344 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 C4BPAP04003 597 aaKnown RBP15.66■□□□□ 0.1
PTCH1-201ENST00000331920 EPHA4P54764 986 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 METTL2BQ6P1Q9 378 aaKnown RBP15.66■□□□□ 0.1
PTCH1-201ENST00000331920 TMEM150AQ86TG1 271 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 AQP12AQ8IXF9 295 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 CNOT9Q92600 299 aaKnown RBP15.66■□□□□ 0.1
PTCH1-201ENST00000331920 KCNK12Q9HB15 430 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 DCAF16Q9NXF7 216 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 GPR52Q9Y2T5 361 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 WNT6Q9Y6F9 365 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 SGSHP51688 502 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 ZNF829Q3KNS6 432 aaPredicted RBP15.66■□□□□ 0.1
PTCH1-201ENST00000331920 CHTF18Q8WVB6 975 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 KLHDC7BQ96G42 594 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 OR5B2Q96R09 309 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 CWH43Q9H720 699 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 PDE7BQ9NP56 450 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 GFOD1Q9NXC2 390 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 F5H5P2 479 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 MANBAO00462 879 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 HOXA1P49639 335 aaPredicted RBP15.66■□□□□ 0.1
PTCH1-201ENST00000331920 RPS18P62269 152 aaKnown RBP15.66■□□□□ 0.1
PTCH1-201ENST00000331920 RPS15P62841 145 aaKnown RBP15.66■□□□□ 0.1
PTCH1-201ENST00000331920 PAPD4Q6PIY7 484 aaKnown RBP15.66■□□□□ 0.1
PTCH1-201ENST00000331920 WFIKKN2Q8TEU8 576 aa15.66■□□□□ 0.1
PTCH1-201ENST00000331920 TCRBV5S4A2TA0A5A2 114 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 DVL2O14641 736 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 GKP32189 559 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 AGTR2P50052 363 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 SLC18A1P54219 525 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 FGFBP1Q14512 234 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 GRASPQ7Z6J2 395 aaPredicted RBP15.65■□□□□ 0.1
PTCH1-201ENST00000331920 CLDN19Q8N6F1 224 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 DMBX1Q8NFW5 382 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 OR5AK2Q8NH90 309 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 CRYM-AS1A6NIL9 109 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 YJEFN3A6XGL0 299 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 H3BML4 177 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 OAS1P00973 400 aaKnown RBP15.65■□□□□ 0.1
PTCH1-201ENST00000331920 CBSLP0DN79 551 aa15.65■□□□□ 0.1
PTCH1-201ENST00000331920 JUNDP17535 347 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms