RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 NGBQ9NPG2 151 aa11.54□□□□□ -0.56
PCF11-201ENST00000298281 HCN4Q9Y3Q4 1203 aa11.54□□□□□ -0.56
PCF11-201ENST00000298281 ADGRB1O14514 1584 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 GABARAPH6UMI1 98 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 GABARAPO95166 117 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 TMEM225BP0DP42 221 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 CHRNEQ04844 493 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 METTL4Q8N3J2 472 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 ESAMQ96AP7 390 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 TCEAL4Q96EI5 215 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 KLHDC7BQ96G42 594 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 ZNF641Q96N77 438 aaPredicted RBP11.53□□□□□ -0.56
PCF11-201ENST00000298281 C11orf49Q9H6J7 331 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 APOBEC3GQ9HC16 384 aaKnown RBP11.53□□□□□ -0.56
PCF11-201ENST00000298281 FAM159BA6NKW6 160 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 BDKRB2P30411 391 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 CDHR3Q6ZTQ4 885 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 RABEPKQ7Z6M1 372 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 ZFP90Q8TF47 636 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 THAP4Q8WY91 577 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 GPR22Q99680 433 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 OR51I1Q9H343 314 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 ERVK13-1Q9NX77 482 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 YY2O15391 372 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 GPX6P59796 221 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 PAPD4Q6PIY7 484 aaKnown RBP11.53□□□□□ -0.56
PCF11-201ENST00000298281 IL1F10Q8WWZ1 152 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 RAB7BQ96AH8 199 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 TTYH3Q9C0H2 523 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 CLEC4EQ9ULY5 219 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 GLOD5A6NK44 160 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 OR5K4A6NMS3 321 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 IL3P08700 152 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 DHRS4L1P0CG22 281 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 PRKCAP17252 672 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 ZNF763Q0D2J5 394 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 OR4F3Q6IEY1 312 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 TMBIM1Q969X1 311 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 SORCS2Q96PQ0 1159 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 FGFBP2Q9BYJ0 223 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 PRTFDC1Q9NRG1 225 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 CAMK2AQ9UQM7 478 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 LSM5Q9Y4Y9 91 aaKnown RBP11.53□□□□□ -0.56
PCF11-201ENST00000298281 ARHGEF28Q8N1W1 1705 aaKnown RBP11.53□□□□□ -0.56
PCF11-201ENST00000298281 A0A0U1RQF3 1178 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 SOCS2O14508 198 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 CDK2AP1O14519 115 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 CAPN5O15484 640 aaPredicted RBP11.53□□□□□ -0.56
PCF11-201ENST00000298281 OR4D2P58180 307 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 TAS2R20P59543 309 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 TMEM14AQ9Y6G1 99 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 hCG_1809904A0A1W2PP81 198 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 A0A1W2PPE2 198 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 A0A1W2PR64 198 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 A0A1W2PRV1 198 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 ZNF28P17035 718 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 HOXD11P31277 338 aaPredicted RBP11.53□□□□□ -0.56
PCF11-201ENST00000298281 GABRA3P34903 492 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 SLC9A3P48764 834 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 CAV2P51636 162 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 AGTRAPQ6RW13 159 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 MEX3BQ6ZN04 569 aaKnown RBP11.53□□□□□ -0.56
PCF11-201ENST00000298281 BPIFCQ8NFQ6 507 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 OR7G2Q8NG99 324 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 STT3BQ8TCJ2 826 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 SGIP1Q9BQI5 828 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 FAIMQ9NVQ4 179 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 NLE1Q9NVX2 485 aaPredicted RBP11.53□□□□□ -0.56
PCF11-201ENST00000298281 SLIT3O75094 1523 aa11.53□□□□□ -0.56
PCF11-201ENST00000298281 OIP5O43482 229 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 LILRB3O75022 631 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 CREG1O75629 220 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 ALPIP09923 528 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 ADORA3P0DMS8 318 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 NDUFV2P19404 249 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 AOC1P19801 751 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 CCNHP51946 323 aaPredicted RBP11.52□□□□□ -0.56
PCF11-201ENST00000298281 F2RL1P55085 397 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 GNB2P62879 340 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 TMEM139Q8IV31 216 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 L3MBTL4Q8NA19 623 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 CANT1Q8WVQ1 401 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 SLC30A2Q9BRI3 323 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 HES7Q9BYE0 225 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 SAP130Q9H0E3 1048 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 SAV1Q9H4B6 383 aaPredicted RBP11.52□□□□□ -0.56
PCF11-201ENST00000298281 KDELR3O43731 214 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 SOX14O95416 240 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 PTAFRP25105 342 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 SOX9P48436 509 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 ACTC1P68032 377 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 ACTA1P68133 377 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 RAB11BQ15907 218 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 LRIT3Q3SXY7 679 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 ACSBG2Q5FVE4 666 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 SLC2A12Q8TD20 617 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 GNPDA2Q8TDQ7 276 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 FAM117AQ9C073 453 aa11.52□□□□□ -0.56
PCF11-201ENST00000298281 CNIH1O95406 144 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 PAFAH1B3Q15102 231 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms