RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 MARVELD2Q8N4S9 558 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 C16orf78Q8WTQ4 265 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 RHBDF1Q96CC6 855 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 DNTTIP1Q9H147 329 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 MTG2Q9H4K7 406 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 TBCCD1Q9NVR7 557 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 ZNF175Q9Y473 711 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 NUP188Q5SRE5 1749 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 GGT3PA6NGU5 568 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 CNOT4O95628 575 aaKnown RBP11□□□□□ -0.65
LAMA4-201ENST00000230538 CPNE6O95741 557 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 HTR2AP28223 471 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 TUBB3Q13509 450 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 UNQ6126/PRO20091Q6UXV3 157 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 ELMOD2Q8IZ81 293 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 SPRYD4Q8WW59 207 aaPredicted RBP11□□□□□ -0.65
LAMA4-201ENST00000230538 S100PBPQ96BU1 408 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 SCRN2Q96FV2 425 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 C2orf42Q9NWW7 574 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 MYH6P13533 1939 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 E7ESA3 106 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 H3BUI4 141 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 TOXO94900 526 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 PRSS56P0CW18 603 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 DNASE1P24855 282 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 RSU1Q15404 277 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 ZC3H14Q6PJT7 736 aaKnown RBP11□□□□□ -0.65
LAMA4-201ENST00000230538 TMEM205Q6UW68 189 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 ACBD7Q8N6N7 88 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 OR4K3Q96R72 315 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 HDHD5Q9BXW7 423 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 UBE2J1Q9Y385 318 aaPredicted RBP11□□□□□ -0.65
LAMA4-201ENST00000230538 FTCDNL1E5RQL4 147 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 K7ERQ8 282 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 SEC14L5O43304 696 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 SORBS2O94875 1100 aaKnown RBP11□□□□□ -0.65
LAMA4-201ENST00000230538 LATS1O95835 1130 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 SHC2P98077 582 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 ZXDBP98169 803 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 HMBOX1Q6NT76 420 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 NLGN4XQ8N0W4 816 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 OR52B6Q8NGF0 335 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 ZDHHC1Q8WTX9 485 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 ECHDC3Q96DC8 303 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 MSANTD3Q96H12 275 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 CA14Q9ULX7 337 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 OR1A2Q9Y585 309 aa11□□□□□ -0.65
LAMA4-201ENST00000230538 SCGB2A1O75556 95 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 PON2Q15165 354 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 CST6Q15828 149 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 SLC16A9Q7RTY1 509 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 CLECL1Q8IZS7 167 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 CREB3L4Q8TEY5 395 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 BMFQ96LC9 184 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 GPR83Q9NYM4 423 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 A0A0A6YYH2 397 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 A6NJ64 397 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 LRRTM2O43300 516 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 CREBL2O60519 120 aaPredicted RBP10.99□□□□□ -0.65
LAMA4-201ENST00000230538 P04436 131 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 BPIP17213 487 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 SNTB2Q13425 540 aaKnown RBP10.99□□□□□ -0.65
LAMA4-201ENST00000230538 CEACAM7Q14002 265 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 TMEM173Q86WV6 379 aaPredicted RBP10.99□□□□□ -0.65
LAMA4-201ENST00000230538 SLC41A3Q96GZ6 507 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 HIF3AQ9Y2N7 669 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 PHRF1Q9P1Y6 1649 aaKnown RBP10.99□□□□□ -0.65
LAMA4-201ENST00000230538 ADH6P28332 368 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 STEAP4Q687X5 459 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 AWAT2Q6E213 333 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 PLBD1Q6P4A8 553 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 GSG1LQ6UXU4 331 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 UNC5DQ6UXZ4 953 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 TRIM46Q7Z4K8 759 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 TMEM135Q86UB9 458 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 KLHDC8AQ8IYD2 350 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 TEX26Q8N6G2 289 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 TSNAXQ99598 290 aaKnown RBP10.99□□□□□ -0.65
LAMA4-201ENST00000230538 ADAM18Q9Y3Q7 739 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 HSPE1-MOB4S4R3N1 261 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 SPINT3P49223 89 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 CLCN2P51788 898 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 NTRK2Q16620 822 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 UBE2UQ5VVX9 321 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 MAMDC2Q7Z304 686 aaPredicted RBP10.99□□□□□ -0.65
LAMA4-201ENST00000230538 COMTD1Q86VU5 262 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 ASCC1Q8N9N2 400 aaKnown RBP10.99□□□□□ -0.65
LAMA4-201ENST00000230538 OR4K13Q8NH42 304 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 TMEM19Q96HH6 336 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 PAAF1Q9BRP4 392 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 HAPLN2Q9GZV7 340 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 PRELID1Q9Y255 219 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 NAV1Q8NEY1 1877 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 CAPN3P20807 821 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 C5AR1P21730 350 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 GSCP56915 257 aaPredicted RBP10.99□□□□□ -0.65
LAMA4-201ENST00000230538 PPA1Q15181 289 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 CCDC28AQ8IWP9 274 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 IL17RCQ8NAC3 791 aa10.99□□□□□ -0.65
LAMA4-201ENST00000230538 MEPEQ9NQ76 525 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms