RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 DCAF7P61962 342 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 LCP2Q13094 533 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 SPIN4Q56A73 249 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 MEX3BQ6ZN04 569 aaKnown RBP17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 PACS2Q86VP3 889 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 LIX1Q8N485 282 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 NEIL3Q8TAT5 605 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 CTHRC1Q96CG8 243 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 KLHL29Q96CT2 875 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 ERP27Q96DN0 273 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 HSPBAP1Q96EW2 488 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 LURAP1Q96LR2 239 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 JSRP1Q96MG2 331 aaPredicted RBP17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 RHOXF2Q9BQY4 288 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 ANGPTL4Q9BY76 406 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 SHCBP1LQ9BZQ2 653 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 BRINP2Q9C0B6 783 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 PPCSQ9HAB8 311 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 SLC24A3Q9HC58 644 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 ZNF639Q9UID6 485 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 EXPH5Q8NEV8 1989 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 FBN2P35556 2912 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 SERTM1A2A2V5 107 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 BCAS2O75934 225 aaPredicted RBP17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 FAM153BP0C7A2 387 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 RFPL3SP0C7P2 107 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 PYGBP11216 843 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 GPX3P22352 226 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 ABCD3P28288 659 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 FEN1P39748 380 aaKnown RBP17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 GSTM5P46439 218 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 FBXW4P57775 412 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 MGAT2Q10469 447 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 FAM153CQ494X1 144 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 C1orf185Q5T7R7 199 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 TMEM81Q6P7N7 255 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 RPRMLQ8N4K4 120 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 OR10Q1Q8NGQ4 319 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 MAT2BQ9NZL9 334 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 PRODH2Q9UF12 536 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 FAM215AQ9Y5M1 114 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 CCDC168Q8NDH2 2452 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 NCKAP5O14513 1909 aa17.5■□□□□ 0.39
CCDC28A-203ENST00000617445 ARHGAP21Q5T5U3 1957 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 GOLGA8RI6L899 631 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 TOXO94900 526 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 ESRRBO95718 433 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 GLI4P10075 376 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 IGFBP2P18065 325 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 GDF1P27539 372 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 ZFP36L2P47974 494 aaKnown RBP17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 ALDH9A1P49189 494 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 TFF3Q07654 80 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 ACSM2AQ08AH3 577 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 HEPACAMQ14CZ8 416 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 SF3B4Q15427 424 aaKnown RBP eCLIP17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 ACSM2BQ68CK6 577 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 TMEM64Q6YI46 380 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 NUP54Q7Z3B4 507 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 ZNF675Q8TD23 568 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 MZB1Q8WU39 189 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 LCORQ96JN0 433 aaPredicted RBP17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 ZNF681Q96N22 645 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 RILPQ96NA2 401 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 EPB41L4BQ9H329 900 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 SIRT5Q9NXA8 310 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 BCAP29Q9UHQ4 241 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 UTS2RQ9UKP6 389 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 CSMD1Q96PZ7 3565 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 PDZD2O15018 2839 aa17.49■□□□□ 0.39
CCDC28A-203ENST00000617445 POLQO75417 2590 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 AHRRA9YTQ3 701 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 GLRA3O75311 464 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 PPM1BO75688 479 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 ABCB1P08183 1280 aaPredicted RBP17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 ENDOUP21128 410 aaKnown RBP17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 DRD5P21918 477 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 MSX1P28360 303 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 CASP3P42574 277 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 PPICP45877 212 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 MASP1P48740 699 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 PSPHP78330 225 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 SNTA1Q13424 505 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 RTL6Q6ICC9 239 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 GALNT18Q6P9A2 607 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 FAM111BQ6SJ93 734 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 CCDC71Q8IV32 467 aaPredicted RBP17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 NTNG2Q96CW9 530 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 CNRIP1Q96F85 164 aaPredicted RBP17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 TMEM41AQ96HV5 264 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 HBEGFQ99075 208 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 ACPTQ9BZG2 426 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 NXF5Q9H1B4 397 aaKnown RBP17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 MCCC2Q9HCC0 563 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 GIMAP4Q9NUV9 329 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 SPRR3Q9UBC9 169 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 TBK1Q9UHD2 729 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 DLGAP4Q9Y2H0 992 aa17.48■□□□□ 0.39
CCDC28A-203ENST00000617445 GNG14A0A1W2PPG7 69 aa17.47■□□□□ 0.39
CCDC28A-203ENST00000617445 FAM90A27PA6NNH2 459 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms