RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 SHROOM1Q2M3G4 852 aaPredicted RBP4.37□□□□□ -1.71
LINC00397-202ENST00000606785 PARP6Q2NL67 630 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 HKDC1Q2TB90 917 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 ZNF699Q32M78 642 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 DCAF4L1Q3SXM0 396 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 POM121L1PQ3SYA9 428 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 CFAP157Q5JU67 520 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 SPATA46Q5T0L3 261 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 TTC19Q6DKK2 380 aaPredicted RBP4.37□□□□□ -1.71
LINC00397-202ENST00000606785 CENPPQ6IPU0 288 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 NEPROQ6NW34 567 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 CBLN3Q6UW01 205 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 LHFPL4Q7Z7J7 247 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 FAM131BQ86XD5 332 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 CBWD2Q8IUF1 395 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 KRT222Q8N1A0 295 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 ARFGAP2Q8N6H7 521 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 Q8N9P0 234 aaPredicted RBP4.37□□□□□ -1.71
LINC00397-202ENST00000606785 OR6F1Q8NGZ6 308 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 FAM76AQ8TAV0 307 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 ATP8B4Q8TF62 1192 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 PNPLA2Q96AD5 504 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 C4orf36Q96KX1 117 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 CAPNS2Q96L46 248 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 UHRF2Q96PU4 802 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 SH3GL1Q99961 368 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 ZSCAN5AQ9BUG6 496 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 GORASP2Q9H8Y8 452 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 GDAP2Q9NXN4 497 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 RDH8Q9NYR8 311 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 CHMP5Q9NZZ3 219 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 SPATA7Q9P0W8 599 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 TUBGCP4Q9UGJ1 667 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 CHRNA9Q9UGM1 479 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 HPCAL4Q9UM19 191 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 B9D1Q9UPM9 204 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 PPP1R3CQ9UQK1 317 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 NOSIPQ9Y314 301 aaKnown RBP4.37□□□□□ -1.71
LINC00397-202ENST00000606785 PARD3Q8TEW0 1356 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 NPIPB9F8W1W9 429 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 H3BTX0 84 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 CFLARO15519 480 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 TNFSF12O43508 249 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 LMX1BO60663 402 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 RHOBTB1O94844 696 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 SMC2O95347 1197 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 GSTA1P08263 222 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 ANXA4P09525 319 aaPredicted RBP4.36□□□□□ -1.71
LINC00397-202ENST00000606785 TRIM23P36406 574 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 DLSTP36957 453 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 NUCB2P80303 420 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 ITPK1Q13572 414 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 MTF1Q14872 753 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 SLC17A1Q14916 467 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 SYCP1Q15431 976 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 PDK4Q16654 411 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 SGSM1Q2NKQ1 1148 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 CCDC57Q2TAC2 916 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 FAM76BQ5HYJ3 339 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 STPG1Q5TH74 334 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 ASPHD2Q6ICH7 369 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 P4HA3Q7Z4N8 544 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 RANBP3LQ86VV4 465 aaPredicted RBP4.36□□□□□ -1.71
LINC00397-202ENST00000606785 CATSPERDQ86XM0 798 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 PYROXD2Q8N2H3 581 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 ICA1LQ8NDH6 482 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 DDHD1Q8NEL9 900 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 SUN5Q8TC36 379 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 VSTM2LQ96N03 204 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 TESK2Q96S53 571 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 EPYCQ99645 322 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 KAT8Q9H7Z6 458 aaKnown RBP4.36□□□□□ -1.71
LINC00397-202ENST00000606785 CALHM2Q9HA72 323 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 KCNK13Q9HB14 408 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 NMUR1Q9HB89 426 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 COX16Q9P0S2 106 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 KLHL8Q9P2G9 620 aaPredicted RBP4.36□□□□□ -1.71
LINC00397-202ENST00000606785 RNF115Q9Y4L5 304 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 MAB21L2Q9Y586 359 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 CSNK1G3Q9Y6M4 447 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 WDR81Q562E7 1941 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 NINLQ9Y2I6 1382 aa4.36□□□□□ -1.71
LINC00397-202ENST00000606785 WASH3PC4AMC7 463 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 FAM72CH0Y354 149 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 M0QX08 132 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 SDHDO14521 159 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 DYNC1I1O14576 645 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 INPP4BO15327 924 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 MAGEC1O60732 1142 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 ERLIN1O75477 346 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 ZNF821O75541 412 aaPredicted RBP4.35□□□□□ -1.71
LINC00397-202ENST00000606785 SNX4O95219 450 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 FGFR1OPO95684 399 aaKnown RBP4.35□□□□□ -1.71
LINC00397-202ENST00000606785 GOT2P00505 430 aaKnown RBP4.35□□□□□ -1.71
LINC00397-202ENST00000606785 IQCF3P0C7M6 154 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 RPA2P15927 270 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 ATP6V1C1P21283 382 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 CD9P21926 228 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 CCKARP32238 428 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 ACADVLP49748 655 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms