RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 CPN1P15169 458 aa16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 SSTR4P31391 388 aa16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 PHBP35232 272 aa16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 MAP4K2Q12851 820 aa16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 FOXD4Q12950 439 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 IFT88Q13099 833 aa16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 FRG2Q64ET8 278 aa16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 POMZP3Q6PJE2 187 aa16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 OR1J4Q8NGS1 313 aa16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 FRG2BQ96QU4 278 aa16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 ACBD3Q9H3P7 528 aa16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 TEX10Q9NXF1 929 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 CBLCQ9ULV8 474 aa16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 CAMK2AQ9UQM7 478 aa16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 PLEKHA6Q9Y2H5 1048 aa16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 HRNRQ86YZ3 2850 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 C1orf226A1L170 272 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 WASHC1A8K0Z3 465 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 STX16-NPEPL1H3BU86 382 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 STX16O14662 325 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 PPM1BO75688 479 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 CBR3O75828 277 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 RAF1P04049 648 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 ABCB1P08183 1280 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 CPMP14384 443 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 BMP7P18075 431 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 CSNK2A2P19784 350 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 NT5EP21589 574 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 ABCD3P28288 659 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 DEKP35659 375 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 SERPINB8P50452 374 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 NEK2P51955 445 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 CCNG1P51959 295 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 ZNF136P52737 540 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 TOMM20Q15388 145 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 CCNYL2Q5T2Q4 361 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 FNDC7Q5VTL7 733 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 FBXW10Q5XX13 1052 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 TTC19Q6DKK2 380 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 ENPP6Q6UWR7 440 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 NAXEQ8NCW5 288 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 WDYHV1Q96HA8 205 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 GPR78Q96P69 363 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 UCN2Q96RP3 112 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 TM9SF2Q99805 663 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 LRRC1Q9BTT6 524 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 UGT2B28Q9BY64 529 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 TSPYL1Q9H0U9 437 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 NOL11Q9H8H0 719 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 METTL7AQ9H8H3 244 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 JKAMPQ9P055 326 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 PRODH2Q9UF12 536 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 FLNAP21333 2647 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 VPS13CQ709C8 3753 aa16.28■□□□□ 0.2
SHKBP1-227ENST00000602011 BCAS2O75934 225 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 ATP1B1P05026 303 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 KLK1P06870 262 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 COL6A2P12110 1019 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 CYP4B1P13584 511 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 CHMP24386 653 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 PTPN6P29350 595 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 ARL1P40616 181 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 TRA2BP62995 288 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 MRPS25P82663 173 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 GAB1Q13480 694 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 GGTA1PQ4G0N0 100 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 PAMR1Q6UXH9 720 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 VWA5B2Q8N398 1253 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 METTL4Q8N3J2 472 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 DOK4Q8TEW6 326 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 ISL2Q96A47 359 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 LCORQ96JN0 433 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 DACH2Q96NX9 599 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 TRIB1Q96RU8 372 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 EPB41L4BQ9H329 900 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 CPSF2Q9P2I0 782 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 EXO1Q9UQ84 846 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 PCDHA9Q9Y5H5 950 aa16.27■□□□□ 0.2
SHKBP1-227ENST00000602011 ABCA2Q9BZC7 2435 aa16.27■□□□□ 0.19
SHKBP1-227ENST00000602011 ABCB7O75027 752 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 SMIM24O75264 130 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 ERN1O75460 977 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 S1PR1P21453 382 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 DRD5P21918 477 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 GPX3P22352 226 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 TACR1P25103 407 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 GMPRP36959 345 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 PCYT1AP49585 367 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 MAPK12P53778 367 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 KEAP1Q14145 624 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 TSNAXIP1Q2TAA8 658 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 SLC48A1Q6P1K1 146 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 TMEM64Q6YI46 380 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 SAMD14Q8IZD0 417 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 TMCO6Q96DC7 493 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 ERP27Q96DN0 273 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 SFXN3Q9BWM7 321 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 FAIM2Q9BWQ8 316 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 ELOVL6Q9H5J4 265 aa16.26■□□□□ 0.19
SHKBP1-227ENST00000602011 BRF2Q9HAW0 419 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 391.3 ms