RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 SNRPD1P62314 119 aaKnown RBP16.64■□□□□ 0.25
RAB40C-205ENST00000539661 CYP4F8P98187 520 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 UBE3AQ05086 875 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 PRSS53Q2L4Q9 553 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 ZNF284Q2VY69 593 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 KLHL12Q53G59 568 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 PODNL1Q6PEZ8 512 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 MRGPREQ86SM8 312 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 MARCH9Q86YJ5 346 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 GPALPP1Q8IXQ4 340 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 HORMAD2Q8N7B1 307 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 SCMH1Q96GD3 660 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 ACAT2Q9BWD1 397 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 SLC6A16Q9GZN6 736 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 HDHD2Q9H0R4 259 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 SUV39H2Q9H5I1 410 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 ASB6Q9NWX5 421 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 A4GNTQ9UNA3 340 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 CLCA2Q9UQC9 943 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 MANSC4A6NHS7 340 aaPredicted RBP16.64■□□□□ 0.25
RAB40C-205ENST00000539661 CHST10O43529 356 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 SLC16A8O95907 504 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 ANXA3P12429 323 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 MMP11P24347 488 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 SMAD3P84022 425 aaKnown RBP16.64■□□□□ 0.25
RAB40C-205ENST00000539661 HACD4Q5VWC8 232 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 C1orf94Q6P1W5 598 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 ADGRF3Q8IZF5 1079 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 HS6ST3Q8IZP7 471 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 SOCS4Q8WXH5 440 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 SMG7Q92540 1137 aaKnown RBP16.64■□□□□ 0.25
RAB40C-205ENST00000539661 VOPP1Q96AW1 172 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 CCDC120Q96HB5 630 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 SORCS2Q96PQ0 1159 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 GABRPO00591 440 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 LRRTM2O43300 516 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 AKAP8O43823 692 aaKnown RBP16.63■□□□□ 0.25
RAB40C-205ENST00000539661 CTRB1P17538 263 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 PTGS2P35354 604 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 MFSD13AQ14CX5 517 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 SYTL3Q4VX76 610 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 HSD17B12Q53GQ0 312 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 CLLU1Q5K131 121 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 CD276Q5ZPR3 534 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 HIST2H2AA3Q6FI13 130 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 CTRB2Q6GPI1 263 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 ZER1Q7Z7L7 766 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 PPP1R16AQ96I34 528 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 RSPO3Q9BXY4 272 aaPredicted RBP16.63■□□□□ 0.25
RAB40C-205ENST00000539661 RNF32Q9H0A6 362 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 GHITMQ9H3K2 345 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 MVB12BQ9H7P6 319 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 HEXA-AS1Q9H8Q6 139 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 MIEF1Q9NQG6 463 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 TAAR2Q9P1P5 351 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 CBLCQ9ULV8 474 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 KDM4EB2RXH2 506 aaPredicted RBP16.63■□□□□ 0.25
RAB40C-205ENST00000539661 I3L521 148 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 NPC1O15118 1278 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 LZTS3O60299 673 aaPredicted RBP16.63■□□□□ 0.25
RAB40C-205ENST00000539661 PRKAR2AP13861 404 aaKnown RBP16.63■□□□□ 0.25
RAB40C-205ENST00000539661 CCSMST1Q4G0I0 132 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 GPR139Q6DWJ6 353 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 LUZP2Q86TE4 346 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 RBM45Q8IUH3 476 aaKnown RBP16.63■□□□□ 0.25
RAB40C-205ENST00000539661 OR4D11Q8NGI4 311 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 OR5P2Q8WZ92 322 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 RFT1Q96AA3 541 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 TMEM159Q96B96 161 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 NACC2Q96BF6 587 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 EXTL2Q9UBQ6 330 aa16.63■□□□□ 0.25
RAB40C-205ENST00000539661 MMP20O60882 483 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 IFNA7P01567 189 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 EPHX1P07099 455 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 IL3P08700 152 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 ACLYP53396 1101 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 SLBPQ14493 270 aaKnown RBP eCLIP16.62■□□□□ 0.25
RAB40C-205ENST00000539661 LRRC28Q86X40 367 aaPredicted RBP16.62■□□□□ 0.25
RAB40C-205ENST00000539661 OR4K5Q8NGD3 323 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 HGDQ93099 445 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 TIFAQ96CG3 184 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 SRRDQ9UH36 339 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 CXorf51AA0A1B0GTR3 108 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 MTX2O75431 263 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 TGFB1P01137 390 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 KLK1P06870 262 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 C1GALT1C1LP0DN25 315 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 ELK1P19419 428 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 TALDO1P37837 337 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 SLC1A3P43003 542 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 SLC11A1P49279 550 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 TAP2Q03519 686 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 CSTF1Q05048 431 aaKnown RBP16.62■□□□□ 0.25
RAB40C-205ENST00000539661 TMEM44Q2T9K0 475 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 TNFAIP8L2Q6P589 184 aaPredicted RBP16.62■□□□□ 0.25
RAB40C-205ENST00000539661 DNAJC5GQ8N7S2 189 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 POGLUT1Q8NBL1 392 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 TMEM169Q96HH4 297 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 OR2M2Q96R28 347 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 FNDC11Q9BVV2 318 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms