RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 GJB2P29033 226 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 PDHA2P29803 388 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 AXLP30530 894 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 RPL9P32969 192 aaKnown RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 TRIM23P36406 574 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 SOX3P41225 446 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 SULT1E1P49888 294 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 RIDAP52758 137 aaKnown RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 NLRP11P59045 1033 aaKnown RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 CALCOCO2Q13137 446 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 PEX6Q13608 980 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 KIAA0141Q14154 515 aaPredicted RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 ZKSCAN8Q15776 578 aaPredicted RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 PDK4Q16654 411 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 TPD52L1Q16890 204 aaPredicted RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 MAJINQ3KP22 176 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 DCAF4L1Q3SXM0 396 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 LRIT3Q3SXY7 679 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 POM121L1PQ3SYA9 428 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 ACSF3Q4G176 576 aaPredicted RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 FAM106AQ4KMX7 169 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 ZNF311Q5JNZ3 666 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 RSBN1Q5VWQ0 802 aaPredicted RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 LYPLAL1Q5VWZ2 237 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 NCR3LG1Q68D85 454 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 RTL6Q6ICC9 239 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 OR4C11Q6IEV9 310 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 SULT1C3Q6IMI6 304 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 CAPN13Q6MZZ7 669 aaPredicted RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 NIPAL3Q6P499 406 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 SLC39A4Q6P5W5 647 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 CWC27Q6UX04 472 aaKnown RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 TMEM64Q6YI46 380 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 C3P1Q6ZMU1 363 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 RFPL4BQ6ZWI9 263 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 LPCAT2Q7L5N7 544 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 GOLGA7Q7Z5G4 137 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 RPAINQ86UA6 219 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 CATSPERDQ86XM0 798 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 KRTAP7-1Q8IUC3 87 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 ZDHHC21Q8IVQ6 265 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 ZNF679Q8IYX0 411 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 SLC39A11Q8N1S5 342 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 ZCCHC7Q8N3Z6 543 aaKnown RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 SPPL2AQ8TCT8 520 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 GIPC3Q8TF64 312 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 TMEM37Q8WXS4 190 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 SLC25A36Q96CQ1 311 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 NXPE2Q96DL1 559 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 CNDP1Q96KN2 507 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 C2orf48Q96LS8 159 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 ATOH8Q96SQ7 321 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 DCTN5Q9BTE1 182 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 NDUFAF3Q9BU61 184 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 FUNDC2Q9BWH2 189 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 RAB11FIP5Q9BXF6 653 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 STRADBQ9C0K7 418 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 WWP1Q9H0M0 922 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 MTIF3Q9H2K0 278 aaKnown RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 FNDC4Q9H6D8 234 aaPredicted RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 GORASP2Q9H8Y8 452 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 LRRC40Q9H9A6 602 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 UBE2TQ9NPD8 197 aaPredicted RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 YAE1D1Q9NRH1 226 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 SMPD3Q9NY59 655 aaPredicted RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 TECRQ9NZ01 308 aaKnown RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 PAK5Q9P286 719 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 THEGQ9P2T0 379 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 ERVK-18Q9QC07 812 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 LHX3Q9UBR4 397 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 DBF4Q9UBU7 674 aaPredicted RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 KLK11Q9UBX7 282 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 CHMP2BQ9UQN3 213 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 ASB3Q9Y575 518 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 CUX2O14529 1486 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 A0A087WZ39 114 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 BCLAF3A2AJT9 711 aaKnown RBP1.98□□□□□ -2.09
LMNB1-207ENST00000494185 MBLAC1A4D2B0 266 aaPredicted RBP1.98□□□□□ -2.09
LMNB1-207ENST00000494185 YJEFN3A6XGL0 299 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 A8MXK9 166 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 TMCO5BA8MYB1 307 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 K7EQD1 137 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 XPO1O14980 1071 aaKnown RBP1.98□□□□□ -2.09
LMNB1-207ENST00000494185 SDC3O75056 442 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 TSC22D2O75157 780 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 OR4F21O95013 312 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 POP4O95707 220 aaKnown RBP1.98□□□□□ -2.09
LMNB1-207ENST00000494185 IGHV3-13P01766 116 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 CHRNA1P02708 482 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 ZSCAN5DPP0CG00 497 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 ZCCHC18P0CG32 403 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 CLUP10909 449 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 MYOGP15173 224 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 AOC1P19801 751 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 C4BPBP20851 252 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 GPX3P22352 226 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 KRTAP5-9P26371 169 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 ACADSBP45954 432 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 SLC1A6P48664 564 aa1.98□□□□□ -2.09
LMNB1-207ENST00000494185 NOVP48745 357 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms