RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 GSK3BP49841 420 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 AGKQ53H12 422 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 ZNF506Q5JVG8 444 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 WDR25Q64LD2 544 aaPredicted RBP3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 DPY19L2P2Q6ZN68 376 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 TIPARPQ7Z3E1 657 aaKnown RBP3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 SLC47A2Q86VL8 602 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 ZSCAN30Q86W11 494 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 CNNM3Q8NE01 707 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 ANKRD20A12PQ8NF67 263 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 CPXM1Q96SM3 734 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 NDUFAF3Q9BU61 184 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 RAB11FIP5Q9BXF6 653 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 NLNQ9BYT8 704 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 KRT23Q9C075 422 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 HSD3B7Q9H2F3 369 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 GNB4Q9HAV0 340 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 ABCC13Q9NSE7 274 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 CNOT2Q9NZN8 540 aaKnown RBP3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 CLIP2Q9UDT6 1046 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 EMCNQ9ULC0 261 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 PLEKHA6Q9Y2H5 1048 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 ZMYM6O95789 1325 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 SH3BGRLO75368 114 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 STAM2O75886 525 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 SEMA4FO95754 770 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 HCKP08631 526 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 BRCC3P46736 316 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 RPL34P49207 117 aaKnown RBP3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 SLC26A5P58743 744 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 BNIP1Q12981 228 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 SNX1Q13596 522 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 CNPY1Q3B7I2 92 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 TAF3Q5VWG9 929 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 APOOLQ6UXV4 268 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 TMEM26Q6ZUK4 368 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 MOB2Q70IA6 237 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 GOLGA7Q7Z5G4 137 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 ADGRD2Q7Z7M1 963 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 VPS36Q86VN1 386 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 GPBP1Q86WP2 473 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 ARL14Q8N4G2 192 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 OR4Q3Q8NH05 313 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 FCGR1BQ92637 280 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 C14orf79Q96F83 325 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 SAMD8Q96LT4 415 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 TSPAN18Q96SJ8 248 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 KCNK16Q96T55 309 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 NMNAT2Q9BZQ4 307 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 RAB17Q9H0T7 212 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 TMEM231Q9H6L2 316 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 NRN1Q9NPD7 142 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 MIOXQ9UGB7 285 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 IKZF3Q9UKT9 509 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 MTF2Q9Y483 593 aaPredicted RBP3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 STYXL1Q9Y6J8 313 aa3.67□□□□□ -1.82
SMNDC1-205ENST00000477763 A0A0J9YVX5 310 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 MCF2LO15068 1137 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 ECDO95905 644 aaPredicted RBP3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 GOT2P00505 430 aaKnown RBP3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 TGFAP01135 160 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 SNRPCP09234 159 aaKnown RBP3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 GATA1P15976 413 aaPredicted RBP3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 ACADSP16219 412 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 CCNA2P20248 432 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 IL4RP24394 825 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 PRDX6P30041 224 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 MAT2AP31153 395 aaKnown RBP3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 AKT2P31751 481 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 TRIM23P36406 574 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 RABIFP47224 123 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 GMFBP60983 142 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 TRA2BP62995 288 aaKnown RBP3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 NOP14P78316 857 aaKnown RBP3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 GABPB1Q06547 395 aaPredicted RBP3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 PDIA5Q14554 519 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 INAQ16352 499 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 CCL14Q16627 93 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 PCK2Q16822 640 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 PARP6Q2NL67 630 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 HIGD2BQ4VC39 106 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 LIPKQ5VXJ0 399 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 STOX1Q6ZVD7 989 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 RNF148Q8N7C7 305 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 POM121L12Q8N7R1 296 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 FAM71CQ8NEG0 241 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 CCDC51Q96ER9 411 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 ST6GALNAC5Q9BVH7 336 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 GPR174Q9BXC1 333 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 PUS3Q9BZE2 481 aaKnown RBP3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 ZNF490Q9ULM2 529 aaPredicted RBP3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 KLHDC2Q9Y2U9 406 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 FKBP7Q9Y680 259 aa3.66□□□□□ -1.82
SMNDC1-205ENST00000477763 FOXI3A8MTJ6 420 aaPredicted RBP3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 OAS1P00973 400 aaKnown RBP3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 GHRP10912 638 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 CAPN2P17655 700 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 UCP1P25874 307 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms