RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 SLC28A3Q9HAS3 691 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 NDRG4Q9ULP0 352 aaKnown RBP8.37□□□□□ -1.07
RTN4-206ENST00000394611 AK6Q9Y3D8 172 aaKnown RBP8.37□□□□□ -1.07
RTN4-206ENST00000394611 NAALAD2Q9Y3Q0 740 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 OR1F1O43749 312 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 CLDN11O75508 207 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 ITGAMP11215 1152 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 ETV3P41162 512 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 CBLBQ13191 982 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 HES5Q5TA89 166 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 MED27Q6P2C8 311 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 RPTNQ6XPR3 784 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 CEACAM19Q7Z692 300 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 ZNF527Q8NB42 609 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 TMEM145Q8NBT3 493 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 FAM98AQ8NCA5 519 aaKnown RBP8.37□□□□□ -1.07
RTN4-206ENST00000394611 BADQ92934 168 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 VWCEQ96DN2 955 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 ERMAPQ96PL5 475 aaPredicted RBP8.37□□□□□ -1.07
RTN4-206ENST00000394611 PSKH2Q96QS6 385 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 MNTQ99583 582 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 NRTNQ99748 197 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 GTPBP2Q9BX10 602 aaKnown RBP8.37□□□□□ -1.07
RTN4-206ENST00000394611 DPAGT1Q9H3H5 408 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 HPF1Q9NWY4 346 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 CFAP97Q9P2B7 532 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 PRKAG2Q9UGJ0 569 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 RASD1Q9Y272 281 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 MAB21L2Q9Y586 359 aa8.37□□□□□ -1.07
RTN4-206ENST00000394611 SVILO95425 2214 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 A0A1B0GVM2 712 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 KIAA0355O15063 1070 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 ECDO95905 644 aaPredicted RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 RPLP2P05387 115 aaKnown RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 CCR7P32248 378 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 NSG1P42857 185 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 ZNF140P52738 457 aaPredicted RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 CLDN2P57739 230 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 STXBP1P61764 594 aaKnown RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 SLC6A19Q695T7 634 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 FRRS1Q6ZNA5 592 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 GPR26Q8NDV2 337 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 APH1BQ8WW43 257 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 TESCQ96BS2 214 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 F2RL3Q96RI0 385 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 DDOQ99489 341 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 IFT27Q9BW83 186 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 MAGEH1Q9H213 219 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 TDP1Q9NUW8 608 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 ZNF226Q9NYT6 803 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 STOX2Q9P2F5 926 aaPredicted RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 TNFRSF10DQ9UBN6 386 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 USP34Q70CQ2 3546 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 GXYLT2A0PJZ3 443 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 ARNTLO00327 626 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 AGPAT2O15120 278 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 CAPN5O15484 640 aaPredicted RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 NPPAP01160 153 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 HLA-DQA2P01906 255 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 SRPRAP08240 638 aaKnown RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 SNRPBP14678 240 aaKnown RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 DGKGP49619 791 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 ANXA11P50995 505 aaKnown RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 SELENOWP63302 87 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 SNTB2Q13425 540 aaKnown RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 NNATQ16517 81 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 RTN4RL1Q86UN2 441 aaPredicted RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 BPHLQ86WA6 291 aaPredicted RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 PLCZ1Q86YW0 608 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 CCDC116Q8IYX3 515 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 C9orf43Q8TAL5 461 aaPredicted RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 ZCCHC10Q8TBK6 192 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 HRASLS5Q96KN8 279 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 ZNF607Q96SK3 696 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 IKZF2Q9UKS7 526 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 EDARQ9UNE0 448 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 RANBP2P49792 3224 aaKnown RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 NPIPB15A6NHN6 443 aaPredicted RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 PRKYO43930 277 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 TRIM3O75382 744 aaPredicted RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 PCDH8O95206 1070 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 NAT2P11245 290 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 ETV5P41161 510 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 ETV1P50549 477 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 BCL2A1Q16548 175 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 SYPL1Q16563 259 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 SCGB2B2Q4G0G5 96 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 ESCO2Q56NI9 601 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 CDKL4Q5MAI5 379 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 CAPN13Q6MZZ7 669 aaPredicted RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 LYPD4Q6UWN0 246 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 LRRN1Q6UXK5 716 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 CERS6Q6ZMG9 384 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 RELL2Q8NC24 303 aaPredicted RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 TM9SF4Q92544 642 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 DUS3LQ96G46 650 aaKnown RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 C7orf34Q96L11 122 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 C17orf62Q9BQA9 187 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 XKR8Q9H6D3 395 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 SYNPO2LQ9H987 977 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms