RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 AMIGO1Q86WK6 493 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 SLC7A13Q8TCU3 470 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 GNPDA2Q8TDQ7 276 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 PLA2G2FQ9BZM2 168 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 ZBTB20Q9HC78 741 aaPredicted RBP17.03■□□□□ 0.32
CD40-201ENST00000372276 CPNE5Q9HCH3 593 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 MOSPD1Q9UJG1 213 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 PCOLCE2Q9UKZ9 415 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 UPK1BO75841 260 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 AIFM1O95831 613 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 ETV6P41212 452 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 KIR2DS3Q14952 304 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 SHHQ15465 462 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 C9orf50Q5SZB4 431 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 ANKRD54Q6NXT1 300 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 FAM180BQ6P0A1 224 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 OR8K5Q8NH50 307 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 ZFPM2Q8WW38 1151 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 LCN9Q8WX39 176 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 TAPBPLQ9BX59 468 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 AICDAQ9GZX7 198 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 KLHL31Q9H511 634 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 NTMQ9P121 344 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 ATG4BQ9Y4P1 393 aa17.03■□□□□ 0.32
CD40-201ENST00000372276 TBC1D3DA0A087WVF3 549 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 TBC1D3IA0A087WXS9 549 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 TBC1D3EA0A087X179 549 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 TBC1D3KA0A087X1G2 549 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 PRAMEF27A3QJZ7 478 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 TBC1D3FA6NER0 549 aaPredicted RBP17.02■□□□□ 0.31
CD40-201ENST00000372276 TBC1D3LB9A6J9 549 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 LOC110117498-PIK3R3F6TDL0 507 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 K7EQS6 105 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 APBB3O95704 486 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 ALPPP05187 535 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 HMGN2P05204 90 aaKnown RBP17.02■□□□□ 0.31
CD40-201ENST00000372276 TBC1D3HP0C7X1 549 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 HSMCR30P0CW71 290 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 TGM1P22735 817 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 PSMA1P25786 263 aaKnown RBP17.02■□□□□ 0.31
CD40-201ENST00000372276 PRKAR1BP31321 381 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 BUD31P41223 144 aaPredicted RBP17.02■□□□□ 0.31
CD40-201ENST00000372276 PCYT1AP49585 367 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 ADPRHP54922 357 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 TRAM2Q15035 370 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 GPAT3Q53EU6 434 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 TJAP1Q5JTD0 557 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 TPRG1LQ5T0D9 272 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 TBC1D3GQ6DHY5 549 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 TBC1D3CQ6IPX1 549 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 PAQR7Q86WK9 346 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 TBC1D3Q8IZP1 549 aaPredicted RBP17.02■□□□□ 0.31
CD40-201ENST00000372276 AMER3Q8N944 861 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 TMEM145Q8NBT3 493 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 OR4K5Q8NGD3 323 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 PIK3R3Q92569 461 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 ACTRT3Q9BYD9 372 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 ISYNA1Q9NPH2 558 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 C11orf16Q9NQ32 467 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 MRPS18AQ9NVS2 196 aaKnown RBP17.02■□□□□ 0.31
CD40-201ENST00000372276 KLHL3Q9UH77 587 aa17.02■□□□□ 0.31
CD40-201ENST00000372276 LOC100506127A0A0U1RQW1 187 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 PRSS38A1L453 326 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 ISM1B1AKI9 464 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 TNFRSF10CO14798 259 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 ASGR2P07307 311 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 CHRM5P08912 532 aaPredicted RBP17.01■□□□□ 0.31
CD40-201ENST00000372276 DBTP11182 482 aaKnown RBP17.01■□□□□ 0.31
CD40-201ENST00000372276 LAMP2P13473 410 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 CD72P21854 359 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 TIE1P35590 1138 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 GIPRP48546 466 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 CDK5Q00535 292 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 ST3GAL3Q11203 375 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 MLLT11Q13015 90 aaPredicted RBP17.01■□□□□ 0.31
CD40-201ENST00000372276 LASP1Q14847 261 aaKnown RBP17.01■□□□□ 0.31
CD40-201ENST00000372276 SPHARQ15513 63 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 AGAP7PQ5VUJ5 663 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 CCDC116Q8IYX3 515 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 CYP4Z2PQ8N1L4 340 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 FLCNQ8NFG4 579 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 NUP43Q8NFH3 380 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 OR4D11Q8NGI4 311 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 OR5D16Q8NGK9 328 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 ELP4Q96EB1 424 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 CNRIP1Q96F85 164 aaPredicted RBP17.01■□□□□ 0.31
CD40-201ENST00000372276 OTUB1Q96FW1 271 aaPredicted RBP17.01■□□□□ 0.31
CD40-201ENST00000372276 ARHGDIGQ99819 225 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 KXD1Q9BQD3 176 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 ALOXE3Q9BYJ1 711 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 POLR2J2Q9GZM3 115 aaKnown RBP17.01■□□□□ 0.31
CD40-201ENST00000372276 KRCC1Q9NPI7 259 aaPredicted RBP17.01■□□□□ 0.31
CD40-201ENST00000372276 CHCHD3Q9NX63 227 aaKnown RBP17.01■□□□□ 0.31
CD40-201ENST00000372276 DIMT1Q9UNQ2 313 aaKnown RBP17.01■□□□□ 0.31
CD40-201ENST00000372276 SNX11Q9Y5W9 270 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 NINQ8N4C6 2090 aa17.01■□□□□ 0.31
CD40-201ENST00000372276 MN1Q10571 1320 aaPredicted RBP17■□□□□ 0.31
CD40-201ENST00000372276 OR52A4PA6NMU1 304 aa17■□□□□ 0.31
CD40-201ENST00000372276 PGRMC2O15173 223 aa17■□□□□ 0.31
CD40-201ENST00000372276 SEMA7AO75326 666 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms