RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 LOXL2Q9Y4K0 774 aa17.39■□□□□ 0.37
CLN3-206ENST00000360019 AP4S1Q9Y587 144 aa17.39■□□□□ 0.37
CLN3-206ENST00000360019 GVINP1Q7Z2Y8 2422 aa17.39■□□□□ 0.37
CLN3-206ENST00000360019 CPNE3O75131 537 aaKnown RBP17.38■□□□□ 0.37
CLN3-206ENST00000360019 ONECUT2O95948 504 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 UMPSP11172 480 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 S1PR1P21453 382 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 MAGEA8P43361 318 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 SESN3P58005 492 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 FOXL2P58012 376 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 MAP4K2Q12851 820 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 SERTAD2Q14140 314 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 EXOSC7Q15024 291 aaKnown RBP17.38■□□□□ 0.37
CLN3-206ENST00000360019 MFSD4BQ5TF39 518 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 MFSD12Q6NUT3 480 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 ENPP6Q6UWR7 440 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 DHRS13Q6UX07 377 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 WDR53Q7Z5U6 358 aaPredicted RBP17.38■□□□□ 0.37
CLN3-206ENST00000360019 GLRX5Q86SX6 157 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 PRSS58Q8IYP2 241 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 LILRA2Q8N149 483 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 VWA5B2Q8N398 1253 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 DEFB124Q8NES8 71 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 RIT1Q92963 219 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 STRADBQ9C0K7 418 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 TGIF2Q9GZN2 237 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 ADAP2Q9NPF8 381 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 SLC39A1Q9NY26 324 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 ZNF639Q9UID6 485 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 ANAPC2Q9UJX6 822 aa17.38■□□□□ 0.37
CLN3-206ENST00000360019 HRKO00198 91 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 CBX7O95931 251 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 RECKO95980 971 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 BCHEP06276 602 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 ETV5P41161 510 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 PCBP3P57721 371 aaKnown RBP17.37■□□□□ 0.37
CLN3-206ENST00000360019 DUSP8Q13202 625 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 MAP7Q14244 749 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 MYBPC3Q14896 1274 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 LCN10Q6JVE6 187 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 TMEM151BQ8IW70 566 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 LGI4Q8N135 537 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 STT3BQ8TCJ2 826 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 XAGE5Q8WWM1 108 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 TMEM19Q96HH6 336 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 OR7D2Q96RA2 312 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 SEPHS2Q99611 448 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 ACTRT3Q9BYD9 372 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 VN1R1Q9GZP7 353 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 OLAHQ9NV23 265 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 ARMC1Q9NVT9 282 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 AKAP7Q9P0M2 348 aaPredicted RBP17.37■□□□□ 0.37
CLN3-206ENST00000360019 KCNE3Q9Y6H6 103 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.37■□□□□ 0.37
CLN3-206ENST00000360019 PMS2P1A4D2B8 440 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 MEN1O00255 615 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 CSO75390 466 aaKnown RBP17.37■□□□□ 0.37
CLN3-206ENST00000360019 PRKD3O94806 890 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 FUT5Q11128 374 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 NKG7Q16617 165 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 TBCELQ5QJ74 424 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 IRAK1BP1Q5VVH5 260 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 SLCO6A1Q86UG4 719 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 SLC44A2Q8IWA5 706 aaPredicted RBP17.37■□□□□ 0.37
CLN3-206ENST00000360019 OR10Q1Q8NGQ4 319 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 AKIRIN1Q9H9L7 192 aaPredicted RBP17.37■□□□□ 0.37
CLN3-206ENST00000360019 THUMPD1Q9NXG2 353 aaKnown RBP17.37■□□□□ 0.37
CLN3-206ENST00000360019 ANGPTL2Q9UKU9 493 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 MKL2Q9ULH7 1088 aa17.37■□□□□ 0.37
CLN3-206ENST00000360019 PROB1E7EW31 1015 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 MT-CO3P00414 261 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 IFNA16P05015 189 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 ZGLP1P0C6A0 271 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 BIKQ13323 160 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 SYPL1Q16563 259 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 RPS26P11Q5JNZ5 115 aaPredicted RBP17.36■□□□□ 0.37
CLN3-206ENST00000360019 EXOSC6Q5RKV6 272 aaKnown RBP17.36■□□□□ 0.37
CLN3-206ENST00000360019 CDC73Q6P1J9 531 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 SHISA6Q6ZSJ9 500 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 CCDC80Q76M96 950 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 RAB11FIP2Q7L804 512 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 PACS2Q86VP3 889 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 EID3Q8N140 333 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 PQLC1Q8N2U9 271 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 SLC16A11Q8NCK7 471 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 PAPD5Q8NDF8 572 aaKnown RBP17.36■□□□□ 0.37
CLN3-206ENST00000360019 OR52R1Q8NGF1 315 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 NRG4Q8WWG1 115 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 LIN37Q96GY3 246 aaPredicted RBP17.36■□□□□ 0.37
CLN3-206ENST00000360019 PHOX2BQ99453 314 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 PKP2Q99959 881 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 P2RX2Q9UBL9 471 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 RIMS3Q9UJD0 308 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 ANGPT4Q9Y264 503 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 B3GALT1Q9Y5Z6 326 aa17.36■□□□□ 0.37
CLN3-206ENST00000360019 TCRBV16S1A1N1A0A5B0 115 aa17.35■□□□□ 0.37
CLN3-206ENST00000360019 TMEM229AB2RXF0 380 aa17.35■□□□□ 0.37
CLN3-206ENST00000360019 TMX2-CTNND1H3BSU7 103 aa17.35■□□□□ 0.37
CLN3-206ENST00000360019 ASNA1O43681 348 aa17.35■□□□□ 0.37
CLN3-206ENST00000360019 TIPRLO75663 272 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms