RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Btbd35f10A2CG92 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f3A2CGC2 496 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f13B8JKF6 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Speer4cG3UXD1 256 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f2J3QMS5 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f25J3QMV9 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f6J3QMW9 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f26J3QNK2 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f24J3QNQ5 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f8J3QQ50 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gm10354K7N6A0 256 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f17L7MU81 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f18L7MU83 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 AmbnO55189 407 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 P2ry2P35383 373 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Prox1P48437 737 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Fitm2P59266 262 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f14Q1LZI5 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Fahd2Q3TC72 313 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Osgin2Q3TEE9 550 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Ctu2Q3U308 514 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f27Q5FWA1 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Olfr1134Q7TR43 312 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Abhd16bQ80YU0 474 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 IfneQ80ZF2 192 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Fastkd3Q8BSN9 661 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Dpep2Q8C255 478 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Slc49a3Q8CE47 516 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Tmem125Q8CHQ6 216 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Olfr586Q8VH13 317 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 SelenomQ8VHC3 145 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Slc2a10Q8VHD6 536 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Sec16bQ91XT4 1051 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 BollQ924M5 281 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 GMCL1P1Q99N64 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Trim16Q99PP9 556 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Cyc1Q9D0M3 325 aaKnown RBP13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Myg1Q9JK81 380 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gm44973A0A140LJJ1 189 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Catsperg1E9Q355 1151 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Vmn2r9K7N6Z8 848 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Bcl2a1dO55179 172 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 GcatO88986 416 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 H2-D1P14427 368 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gadd45aP48316 165 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Pcbp3P57722 371 aaKnown RBP13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 PhexP70669 749 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 BcheQ03311 603 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 MitfQ08874 526 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 FcamrQ2TB54 535 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Acsm3Q3UNX5 580 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 MagixQ4KL35 324 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Rbbp4Q60972 425 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Tra2aQ6PFR5 281 aaKnown RBP13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Olfr1045Q7TR80 315 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Trim36Q80WG7 729 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Reep1Q8BGH4 201 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Klhl31Q8BWA5 634 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gin1Q8K259 518 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 HscbQ8K3A0 234 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Q8R3C1 574 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Zfp709Q8VC29 727 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Pex12Q8VC48 359 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Olfr700Q8VFM5 316 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Znf524Q9D0B1 321 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 MtpapQ9D0D3 585 aaKnown RBP13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Ribc2Q9D4Q1 309 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Lypd6bQ9D7F2 191 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Pou5f2Q9DAC9 329 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Tm9sf3Q9ET30 587 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Ehd3Q9QXY6 535 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Clec2iQ9WVF9 217 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 HelzQ6DFV5 1964 aaKnown RBP13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Olfr671A0A1B0GSN5 317 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Xlr5aA2BI45 236 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Vmn1r25H3BLP0 302 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Olfr741L7N1Y5 311 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Hipk1O88904 1210 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Dnajb5O89114 348 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Hyal4Q05A56 481 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Patl1Q3TC46 770 aaKnown RBP13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Sema3gQ4LFA9 780 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Ankrd13bQ5F259 626 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Prg2Q61878 223 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Doc2aQ7TNF0 405 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Slc25a40Q8BGP6 337 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Tgm6Q8BM11 706 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Peli2Q8BST6 419 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gas2l1Q8JZP9 678 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Ift80Q8K057 777 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Tmem203Q8R235 136 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Vmn1r24Q8R2D6 296 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 RergQ8R367 199 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Txndc9Q9CQ79 226 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Q9D3J9 298 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Rhbdl2A2AGA4 302 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gm8765B7ZWJ3 1017 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Vmn2r56E9Q4U5 779 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Znf296E9Q6W4 445 aaKnown RBP13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Olfr640E9Q7P5 314 aa13.94□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms