RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 OR5M3Q8NGP4 307 aa17.55■□□□□ 0.4
CCDC28A-203ENST00000617445 DOK4Q8TEW6 326 aa17.55■□□□□ 0.4
CCDC28A-203ENST00000617445 TRIM8Q9BZR9 551 aa17.55■□□□□ 0.4
CCDC28A-203ENST00000617445 FARSBQ9NSD9 589 aaKnown RBP17.55■□□□□ 0.4
CCDC28A-203ENST00000617445 TMEM216Q9P0N5 145 aa17.55■□□□□ 0.4
CCDC28A-203ENST00000617445 ZNF225Q9UK10 706 aa17.55■□□□□ 0.4
CCDC28A-203ENST00000617445 ACAD8Q9UKU7 415 aa17.55■□□□□ 0.4
CCDC28A-203ENST00000617445 CES1P1Q9UKY3 287 aa17.55■□□□□ 0.4
CCDC28A-203ENST00000617445 CNOT11Q9UKZ1 510 aaKnown RBP17.55■□□□□ 0.4
CCDC28A-203ENST00000617445 PCDHGB3Q9Y5G1 929 aa17.55■□□□□ 0.4
CCDC28A-203ENST00000617445 NPFFR2Q9Y5X5 522 aa17.55■□□□□ 0.4
CCDC28A-203ENST00000617445 A0A1B0GTL3 188 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 CCDC151A5D8V7 595 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 FAM47E-STBD1D6RA91 191 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 C19orf84I3L1E1 186 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 CDH16O75309 829 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 ULK1O75385 1050 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 OR4F21O95013 312 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 SNX4O95219 450 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 ATP1B1P05026 303 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 CSNK2A2P19784 350 aaPredicted RBP17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 NT5EP21589 574 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 PRKAA2P54646 552 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 PMPCAQ10713 525 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 MAP4K2Q12851 820 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 CSTF3Q12996 717 aaKnown RBP17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 RPS6KA2Q15349 733 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 UNC50Q53HI1 259 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 WLSQ5T9L3 541 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 TMEM198Q66K66 360 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 GPRIN3Q6ZVF9 776 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 RPS27LQ71UM5 84 aaKnown RBP17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 LRRC25Q8N386 305 aaPredicted RBP17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 GBP7Q8N8V2 638 aaPredicted RBP17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 EIF1ADQ8N9N8 165 aaKnown RBP17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 ADIPOR1Q96A54 375 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 TM4SF18Q96CE8 201 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 DOHHQ9BU89 302 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 EXO5Q9H790 373 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 ZNF703Q9H7S9 590 aaPredicted RBP17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 PROK2Q9HC23 129 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 PNPLA3Q9NST1 481 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 PSMC3IPQ9P2W1 217 aaPredicted RBP17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 DCDC2Q9UHG0 476 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 RNF6Q9Y252 685 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 DCHS2Q6V1P9 2916 aa17.54■□□□□ 0.4
CCDC28A-203ENST00000617445 MANBAO00462 879 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 DLX3O60479 287 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 CT62P0C5K7 136 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 GABRA1P14867 456 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 NAGAP17050 411 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 TSPAN8P19075 237 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 NAA20P61599 178 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 SLC29A2Q14542 456 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 PRAMEF20Q5VT98 475 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 ZNF585AQ6P3V2 769 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 B3GNT6Q6ZMB0 384 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 SAMD14Q8IZD0 417 aaPredicted RBP17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 VWA5B2Q8N398 1253 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 CDYL2Q8N8U2 506 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 OR5M9Q8NGP3 310 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 CHTF18Q8WVB6 975 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 DIO2Q92813 273 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 CCDC126Q96EE4 140 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 C14orf79Q96F83 325 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 TREX2Q9BQ50 279 aaPredicted RBP17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 TXLNGYQ9BZA5 131 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 KCNJ16Q9NPI9 418 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 LIPGQ9Y5X9 500 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 ZNF780BQ9Y6R6 833 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 HCFC1P51610 2035 aa17.53■□□□□ 0.4
CCDC28A-203ENST00000617445 A0A1W2PS29 197 aa17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 FOXO6A8MYZ6 492 aa17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 TRIM3O75382 744 aaPredicted RBP17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 ENO1P06733 434 aaKnown RBP17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 S1PR1P21453 382 aa17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 HMOX2P30519 316 aa17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 PKNOX1P55347 436 aa17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 NUP107P57740 925 aa17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 PRICKLE4Q2TBC4 344 aa17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 ZNF295-AS1Q8N0V1 137 aa17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 C1orf52Q8N6N3 182 aaKnown RBP17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 METTL6Q8TCB7 284 aa17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 SPPL2AQ8TCT8 520 aa17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 L3HYPDHQ96EM0 354 aa17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 ZNF597Q96LX8 424 aa17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 TMEM237Q96Q45 408 aa17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 TTYH2Q9BSA4 534 aa17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 MCM8Q9UJA3 840 aa17.52■□□□□ 0.4
CCDC28A-203ENST00000617445 TACC2O95359 2948 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 LRRC3CA6NJW4 275 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 H3BQF6 201 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 ACOX3O15254 700 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 ERAL1O75616 437 aaKnown RBP17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 CELA3AP09093 270 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 RHOXF2BP0C7M4 288 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 DRD2P14416 443 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 KRT15P19012 456 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 CAPN3P20807 821 aa17.51■□□□□ 0.39
CCDC28A-203ENST00000617445 ELAVL4P26378 380 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms