RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 BHLHA9Q7RTU4 235 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 VASH2Q86V25 355 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 ZDHHC21Q8IVQ6 265 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 OR4N5Q8IXE1 308 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 CCDC65Q8IXS2 484 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 RAB42Q8N4Z0 105 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 CNBD1Q8NA66 436 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 OR9Q2Q8NGE9 314 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 WDR36Q8NI36 951 aaKnown RBP4.39□□□□□ -1.71
LINC00397-202ENST00000606785 SHC3Q92529 594 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 ZNF75CPQ92670 426 aaPredicted RBP4.39□□□□□ -1.71
LINC00397-202ENST00000606785 INPP4AQ96PE3 977 aaPredicted RBP4.39□□□□□ -1.71
LINC00397-202ENST00000606785 RBM24Q9BX46 236 aaKnown RBP4.39□□□□□ -1.71
LINC00397-202ENST00000606785 SLC7A5P2Q9GIP4 190 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 TMEM117Q9H0C3 514 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 SLC25A19Q9HC21 320 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 ATAD3AQ9NVI7 634 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 KLK11Q9UBX7 282 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 ATP6V1HQ9UI12 483 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 LNPEPQ9UIQ6 1025 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 MRPS7Q9Y2R9 242 aaKnown RBP4.39□□□□□ -1.71
LINC00397-202ENST00000606785 RNF215Q9Y6U7 377 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 ZHX2Q9Y6X8 837 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 SCN5AQ14524 2016 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 LINC00854A0A1B0GVQ3 168 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 OR5H15A6NDH6 313 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 PMS2P5A8MQ11 134 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 SLCO1B7G3V0H7 640 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 MAGEB3O15480 346 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 CEACAM4O75871 244 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 CLUP10909 449 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 PDHBP11177 359 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 GLRA2P23416 452 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 MAT2AP31153 395 aaKnown RBP4.38□□□□□ -1.71
LINC00397-202ENST00000606785 TIMP3P35625 211 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 MTIF2P46199 727 aaKnown RBP4.38□□□□□ -1.71
LINC00397-202ENST00000606785 ZFP36L2P47974 494 aaKnown RBP4.38□□□□□ -1.71
LINC00397-202ENST00000606785 SLC1A6P48664 564 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 NAPAP54920 295 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 GSCP56915 257 aaPredicted RBP4.38□□□□□ -1.71
LINC00397-202ENST00000606785 HERVK_113P63132 956 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 ERVK-8P63133 956 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 CCDC173Q0VFZ6 552 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 CHIT1Q13231 466 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 GPM6BQ13491 265 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 HNRNPDQ14103 355 aaKnown RBP4.38□□□□□ -1.71
LINC00397-202ENST00000606785 TRIP10Q15642 601 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 TPD52L1Q16890 204 aaPredicted RBP4.38□□□□□ -1.71
LINC00397-202ENST00000606785 MAJINQ3KP22 176 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 RABL6Q3YEC7 729 aaPredicted RBP4.38□□□□□ -1.71
LINC00397-202ENST00000606785 CCDC152Q4G0S7 254 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 LRRC23Q53EV4 343 aaPredicted RBP4.38□□□□□ -1.71
LINC00397-202ENST00000606785 ZNF311Q5JNZ3 666 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 FFAR4Q5NUL3 377 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 FAM53AQ6NSI3 398 aaPredicted RBP4.38□□□□□ -1.71
LINC00397-202ENST00000606785 STEAP1BQ6NZ63 245 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 SLC39A4Q6P5W5 647 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 CCDC80Q76M96 950 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 GPR142Q7Z601 462 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 GPBP1Q86WP2 473 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 APLFQ8IW19 511 aaPredicted RBP4.38□□□□□ -1.71
LINC00397-202ENST00000606785 EFCAB13Q8IY85 973 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 FAM133AQ8N9E0 248 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 DRAXINQ8NBI3 349 aaPredicted RBP4.38□□□□□ -1.71
LINC00397-202ENST00000606785 RELL2Q8NC24 303 aaPredicted RBP4.38□□□□□ -1.71
LINC00397-202ENST00000606785 SLC25A36Q96CQ1 311 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 DHTKD1Q96HY7 919 aaPredicted RBP4.38□□□□□ -1.71
LINC00397-202ENST00000606785 TTC25Q96NG3 672 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 VPS35Q96QK1 796 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 WACQ9BTA9 647 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 ERVK-6Q9BXR3 956 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 LRRCC1Q9C099 1032 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 DCTPP1Q9H773 170 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 STARD5Q9NSY2 213 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 C2orf42Q9NWW7 574 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 TEX10Q9NXF1 929 aaPredicted RBP4.38□□□□□ -1.71
LINC00397-202ENST00000606785 CTNNA3Q9UI47 895 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 KCNG2Q9UJ96 466 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 ANGPTL3Q9Y5C1 460 aa4.38□□□□□ -1.71
LINC00397-202ENST00000606785 SF3B1O75533 1304 aaKnown RBP eCLIP4.38□□□□□ -1.71
LINC00397-202ENST00000606785 IQCMA0A1B0GVH7 501 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 LOC390937A0A1W2PQ73 354 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 XPO1O14980 1071 aaKnown RBP4.37□□□□□ -1.71
LINC00397-202ENST00000606785 NEMFO60524 1076 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 PALMO75781 387 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 IGHEP01854 428 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 FHP07954 510 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 SFTPCP11686 197 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 RPS2P15880 293 aaKnown RBP4.37□□□□□ -1.71
LINC00397-202ENST00000606785 ZNF24P17028 368 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 CEBPBP17676 345 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 TSFMP43897 325 aaKnown RBP4.37□□□□□ -1.71
LINC00397-202ENST00000606785 SGSHP51688 502 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 RWDD2BP57060 319 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 PPIAP62937 165 aaKnown RBP4.37□□□□□ -1.71
LINC00397-202ENST00000606785 SPIBQ01892 262 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 RBBP4Q09028 425 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 LRRC74AQ0VAA2 488 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 GCKRQ14397 625 aa4.37□□□□□ -1.71
LINC00397-202ENST00000606785 HAGHQ16775 308 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms