RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 OR2M5A3KFT3 312 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 FAM47DPA6NHR8 397 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 GOLGA6L19H0YKK7 550 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 RNF103O00237 685 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 PLK4O00444 970 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 KPNA3O00505 521 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 PRAMEF11O60813 436 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 CTSVO60911 334 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 LRCH4O75427 683 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 SLC22A3O75751 556 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 BMP10O95393 424 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 IGSF6O95976 241 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 GYPCP04921 128 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 SERPING1P05155 500 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 TFAP2AP05549 437 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 FAM228BP0C875 321 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 ADRB3P13945 408 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 ERCC2P18074 760 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 HNRNPA2B1P22626 353 aaKnown RBP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 PSMA2P25787 234 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 MIPP30301 263 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 AKT2P31751 481 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 DRG2P55039 364 aaKnown RBP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 NAP1L1P55209 391 aaKnown RBP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 UBASH3AP57075 661 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 PFN3P60673 137 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 RPS21P63220 83 aaKnown RBP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 PPP2R2BQ00005 443 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 RAD51Q06609 339 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 UBE2V1Q13404 147 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 ILKQ13418 452 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 PIGHQ14442 188 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 KIR2DS5Q14953 304 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 DPYSL2Q16555 572 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 BOLA3Q53S33 107 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZNF628Q5EBL2 1059 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 CCNYL2Q5T2Q4 361 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZDHHC20Q5W0Z9 365 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 FAM205BPQ63HN1 556 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 RWDD4Q6NW29 188 aaKnown RBP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 SCYL2Q6P3W7 929 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 ALKBH5Q6P6C2 394 aaKnown RBP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 LINGO4Q6UY18 593 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 PIWIL4Q7Z3Z4 852 aaKnown RBP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 PHLDB2Q86SQ0 1253 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 LUZP1Q86V48 1076 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 LRRC49Q8IUZ0 686 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 PYROXD2Q8N2H3 581 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 C1orf52Q8N6N3 182 aaKnown RBP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 SETD7Q8WTS6 366 aaKnown RBP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 TEKT4Q8WW24 435 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 SCRN2Q96FV2 425 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 OXNAD1Q96HP4 312 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 ST6GAL2Q96JF0 529 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 SERAC1Q96JX3 654 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 BMFQ96LC9 184 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 GDAP1L1Q96MZ0 367 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZNF641Q96N77 438 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZNF599Q96NL3 588 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 DACH2Q96NX9 599 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 KLF6Q99612 283 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 SNRNP25Q9BV90 132 aaKnown RBP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 SLC17A9Q9BYT1 436 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 HAUS2Q9NVX0 235 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 FAM118AQ9NWS6 357 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 RCOR3Q9P2K3 495 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 LHX3Q9UBR4 397 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 LCMT1Q9UIC8 334 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 FADS3Q9Y5Q0 445 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 CSNK1G3Q9Y6M4 447 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZFHX4Q86UP3 3567 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 PIKFYVEQ9Y2I7 2098 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 ASPMQ8IZT6 3477 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 ITPR1Q14643 2758 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 ATRXP46100 2492 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 WDFY3Q8IZQ1 3526 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 IGSF10Q6WRI0 2623 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 SPTY2D1-AS1A0A0U1RR47 76 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 A0A1W2PQ67 120 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 NEMP2A6NFY4 417 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 ARHGAP42A6NI28 874 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 C15orf62A8K5M9 175 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 AGAP14A8MT82 685 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 TMCO5BA8MYB1 307 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZNF487B1APH4 448 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 EEF2KO00418 725 aaKnown RBP3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 SLC31A1O15431 190 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 BUB1O43683 1085 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 KRT86O43790 486 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 PRPSAP2O60256 369 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 TM7SF2O76062 418 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 PDE9AO76083 593 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 LDOC1O95751 146 aaPredicted RBP3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 PAK4O96013 591 aaPredicted RBP3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 UGT2B4P06133 528 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 TPM3P06753 285 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 THEGLP0DJG4 465 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 GIMD1P0DJR0 217 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 SKILP12757 684 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms