RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 ZER1Q7Z7L7 766 aa16.46■□□□□ 0.23
ARHGEF1-213ENST00000595897 MEX3DQ86XN8 651 aaKnown RBP16.46■□□□□ 0.23
ARHGEF1-213ENST00000595897 EXOSC8Q96B26 276 aaKnown RBP16.46■□□□□ 0.23
ARHGEF1-213ENST00000595897 TREX2Q9BQ50 279 aaPredicted RBP16.46■□□□□ 0.23
ARHGEF1-213ENST00000595897 MCUBQ9NWR8 336 aa16.46■□□□□ 0.23
ARHGEF1-213ENST00000595897 SPG21Q9NZD8 308 aa16.46■□□□□ 0.23
ARHGEF1-213ENST00000595897 ICKQ9UPZ9 632 aa16.46■□□□□ 0.23
ARHGEF1-213ENST00000595897 SMLR1H3BR10 107 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 SMSP52788 366 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 UBE3AQ05086 875 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 COX10Q12887 443 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 TIGD3Q6B0B8 471 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 ELMOD2Q8IZ81 293 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 ZNF557Q8N988 423 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 OR9A1PQ8NGU1 263 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 OR5P2Q8WZ92 322 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 TBC1D17Q9HA65 648 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 ZSCAN32Q9NX65 697 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 AHSPQ9NZD4 102 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 TET1Q8NFU7 2136 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 ANAPC1Q9H1A4 1944 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 DOCK6Q96HP0 2047 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 NEDD8-MDP1E9PL57 170 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 HMGN4O00479 90 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 C1QBP02746 253 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 TP53P04637 393 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 DDCP20711 480 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 MRPL28Q13084 256 aaKnown RBP16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 SYPL1Q16563 259 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 ZNF57Q68EA5 555 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 QSOX2Q6ZRP7 698 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 TP53I13Q8NBR0 393 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 OR5H6Q8NGV6 325 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 UBE2E3Q969T4 207 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 WDR34Q96EX3 536 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 TMED9Q9BVK6 235 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 HDHD5Q9BXW7 423 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 NEUROD4Q9HD90 331 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 STMN3Q9NZ72 180 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 TRPC4Q9UBN4 977 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 A4GNTQ9UNA3 340 aa16.45■□□□□ 0.22
ARHGEF1-213ENST00000595897 ORC5O43913 435 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 NCR1O76036 304 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 SOD2P04179 222 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 NR2F1P10589 423 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 CTSAP10619 480 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 IFI30P13284 250 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 GABRA5P31644 462 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 MTNR1AP48039 350 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 RAB40BQ12829 278 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 TPBGQ13641 420 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 ASTLQ6HA08 431 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 SLC9B2Q86UD5 537 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 LHFPL3Q86UP9 236 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 TMEM145Q8NBT3 493 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 MED30Q96HR3 178 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 SGPP1Q9BX95 441 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 NIPAL2Q9H841 368 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 TMEM39AQ9NV64 488 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 FBXW2Q9UKT8 454 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 CLCA2Q9UQC9 943 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 LOC102723532A0A0G2JNH3 316 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 A0A0X1KG70 313 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 C12orf71A8MTZ7 269 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 ISM1B1AKI9 464 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 ELFN1P0C7U0 828 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 ACP2P11117 423 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 ACADMP11310 421 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 AVPR1BP47901 424 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 ALDH6A1Q02252 535 aaKnown RBP16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 TMEM25Q86YD3 366 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 TMEM163Q8TC26 289 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 UPRTQ96BW1 309 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 B3GAT2Q9NPZ5 323 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 A0A1W2PRQ8 180 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 TMEM129A0AVI4 362 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 LEFTY2O00292 366 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 PRODHO43272 600 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 TSC22D2O75157 780 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 TRIM3O75382 744 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 OR12D1P0DN82 309 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 NDUFA9Q16795 377 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 SMPDL3AQ92484 453 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 IL17FQ96PD4 163 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 EGLN3Q9H6Z9 239 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 PPP1R3EQ9H7J1 279 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 SLC9A8Q9Y2E8 581 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 SF3B6Q9Y3B4 125 aaKnown RBP16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 PCDHGB7Q9Y5F8 929 aa16.44■□□□□ 0.22
ARHGEF1-213ENST00000595897 A0A1W2PRU2 124 aa16.43■□□□□ 0.22
ARHGEF1-213ENST00000595897 MYCP01106 439 aaPredicted RBP16.43■□□□□ 0.22
ARHGEF1-213ENST00000595897 DDX5P17844 614 aaKnown RBP16.43■□□□□ 0.22
ARHGEF1-213ENST00000595897 OR3A3P47888 321 aa16.43■□□□□ 0.22
ARHGEF1-213ENST00000595897 CCT3P49368 545 aaKnown RBP16.43■□□□□ 0.22
ARHGEF1-213ENST00000595897 MAB21L1Q13394 359 aa16.43■□□□□ 0.22
ARHGEF1-213ENST00000595897 OLIG3Q7RTU3 272 aa16.43■□□□□ 0.22
ARHGEF1-213ENST00000595897 OR5D16Q8NGK9 328 aa16.43■□□□□ 0.22
ARHGEF1-213ENST00000595897 TEX47Q8TBZ9 253 aa16.43■□□□□ 0.22
ARHGEF1-213ENST00000595897 OTUB1Q96FW1 271 aaPredicted RBP16.43■□□□□ 0.22
ARHGEF1-213ENST00000595897 GPA33Q99795 319 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms