RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TRIM64BA6NI03 449 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 UBXN8O00124 270 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 UGDHO60701 494 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 TRIM3O75382 744 aaPredicted RBP15.85■□□□□ 0.13
RETREG3-210ENST00000590541 IL18BPO95998 194 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 INHBAP08476 426 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 MTHFD2P13995 350 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 CD22P20273 847 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 CNTFP26441 200 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 MSH2P43246 934 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 PIK3CGP48736 1102 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 ARFIP1P53367 373 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 SETDB1Q15047 1291 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 UAP1Q16222 522 aaPredicted RBP15.85■□□□□ 0.13
RETREG3-210ENST00000590541 FBXO48Q5FWF7 155 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 LIPJQ5W064 366 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 VASNQ6EMK4 673 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 CNPY4Q8N129 248 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 FAM13CQ8NE31 585 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 KIF18AQ8NI77 898 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 KCTD4Q8WVF5 259 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 SLC44A1Q8WWI5 657 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 MAPKAP1Q9BPZ7 522 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 CENPKQ9BS16 269 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 DOHHQ9BU89 302 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 RBM24Q9BX46 236 aaKnown RBP15.85■□□□□ 0.13
RETREG3-210ENST00000590541 LYRM4Q9HD34 91 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 TRPS1Q9UHF7 1281 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 DMGDHQ9UI17 866 aaKnown RBP15.85■□□□□ 0.13
RETREG3-210ENST00000590541 TMCO1Q9UM00 188 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 CAMK2AQ9UQM7 478 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 ANGPTL3Q9Y5C1 460 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 SPACA6W5XKT8 324 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 NINQ8N4C6 2090 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 HMX2A2RU54 273 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 SH3D21A4FU49 640 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 HRKO00198 91 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 ALDOAP04075 364 aaKnown RBP15.84■□□□□ 0.13
RETREG3-210ENST00000590541 FBXO45P0C2W1 286 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 GFAPP14136 432 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 PIK3CBP42338 1070 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 SF3B4Q15427 424 aaKnown RBP eCLIP15.84■□□□□ 0.13
RETREG3-210ENST00000590541 GRHL2Q6ISB3 625 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 ZNF793Q6ZN11 406 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 DGAT2L6Q6ZPD8 337 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 YTHDF3Q7Z739 585 aaKnown RBP15.84■□□□□ 0.13
RETREG3-210ENST00000590541 DND1Q8IYX4 353 aaKnown RBP15.84■□□□□ 0.13
RETREG3-210ENST00000590541 C9orf106Q8NAJ2 232 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 OR7G3Q8NG95 312 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 ZNF473Q8WTR7 871 aaKnown RBP15.84■□□□□ 0.13
RETREG3-210ENST00000590541 IFT81Q8WYA0 676 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 ISL2Q96A47 359 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 REPS1Q96D71 796 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 CMTM7Q96FZ5 175 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 WDYHV1Q96HA8 205 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 MS4A8Q9BY19 250 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 UBQLN3Q9H347 655 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 CDC42EP4Q9H3Q1 356 aaKnown RBP15.84■□□□□ 0.13
RETREG3-210ENST00000590541 GALNT8Q9NY28 637 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 SLC6A5Q9Y345 797 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 PCDHGA11Q9Y5H2 935 aa15.84■□□□□ 0.13
RETREG3-210ENST00000590541 TLN2Q9Y4G6 2542 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 FGF17O60258 216 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 SCELO95171 688 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 ACSL3O95573 720 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 HPNP05981 417 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 RBP1P09455 135 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 COL6A2P12110 1019 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 CDK9P50750 372 aaKnown RBP15.83■□□□□ 0.12
RETREG3-210ENST00000590541 PHEXP78562 749 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 IGLV3-21P80748 117 aaPredicted RBP15.83■□□□□ 0.12
RETREG3-210ENST00000590541 FOXF2Q12947 444 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 BIKQ13323 160 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 AP5B1Q2VPB7 878 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 NHSL2Q5HYW2 709 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 DCST1Q5T197 706 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 UBE3DQ7Z6J8 389 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 TEX9Q8N6V9 391 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 CEP112Q8N8E3 955 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 NOA1Q8NC60 698 aaKnown RBP15.83■□□□□ 0.12
RETREG3-210ENST00000590541 PIGTQ969N2 578 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 MRRFQ96E11 262 aaKnown RBP15.83■□□□□ 0.12
RETREG3-210ENST00000590541 ZNF597Q96LX8 424 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 F2RL3Q96RI0 385 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 UGT2B28Q9BY64 529 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 CALHM2Q9HA72 323 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 ZNF180Q9UJW8 692 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 ZANQ9Y493 2812 aa15.83■□□□□ 0.12
RETREG3-210ENST00000590541 DOCK7Q96N67 2140 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 ANKRD33BA6NCL7 494 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 TRAPPC6AO75865 159 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 TMIGD3P0DMS9 266 aaPredicted RBP15.82■□□□□ 0.12
RETREG3-210ENST00000590541 PCNAP12004 261 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 BMP7P18075 431 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 SERPINB3P29508 390 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 GMPRP36959 345 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 STT3AP46977 705 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 IRF9Q00978 393 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 NTRK2Q16620 822 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 PFKFB4Q16877 469 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms