RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 CCDC116Q8IYX3 515 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 DNAAF1Q8NEP3 725 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 ESAMQ96AP7 390 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 SYT3Q9BQG1 590 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 SLC2A6Q9UGQ3 507 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 GNG8Q9UK08 70 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 hCG_1809904A0A1W2PP81 198 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 A0A1W2PPE2 198 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 A0A1W2PR64 198 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 A0A1W2PRV1 198 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 C5orf51A6NDU8 294 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 C2orf71A6NGG8 1288 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 D6RAR5 112 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 EEDO75530 441 aaKnown RBP11.4□□□□□ -0.58
NEK9-210ENST00000557026 P2RY2P41231 377 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 RUNDC3AQ59EK9 446 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 KCTD11Q693B1 232 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 SUSD1Q6UWL2 747 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 USP53Q70EK8 1073 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 BORCS6Q96GS4 357 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 TPSD1Q9BZJ3 242 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 TPK1Q9H3S4 243 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 RXFP3Q9NSD7 469 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 AIG1Q9NVV5 245 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 SLCO3A1Q9UIG8 710 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 PRKCAP17252 672 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 GALK1P51570 392 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 TPTEP56180 551 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 IRF9Q00978 393 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 VWA5B1Q5TIE3 1220 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 ANKRD33Q7Z3H0 272 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 GPR149Q86SP6 731 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 ZNF598Q86UK7 904 aaKnown RBP11.4□□□□□ -0.58
NEK9-210ENST00000557026 OR11L1Q8NGX0 322 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 OR5AK3PQ8NH89 298 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 STON2Q8WXE9 905 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 TSACCQ96A04 125 aaPredicted RBP11.4□□□□□ -0.58
NEK9-210ENST00000557026 WDR77Q9BQA1 342 aaPredicted RBP11.4□□□□□ -0.58
NEK9-210ENST00000557026 ACTR6Q9GZN1 396 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 DNTTIP1Q9H147 329 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 METTL8Q9H825 291 aaKnown RBP11.4□□□□□ -0.58
NEK9-210ENST00000557026 MEAF6Q9HAF1 191 aa11.4□□□□□ -0.58
NEK9-210ENST00000557026 PTRH2Q9Y3E5 179 aaKnown RBP11.4□□□□□ -0.58
NEK9-210ENST00000557026 CXorf51AA0A1B0GTR3 108 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 A0A1W2PPH5 198 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 CDC40O60508 579 aaKnown RBP eCLIP11.39□□□□□ -0.59
NEK9-210ENST00000557026 ATF6P18850 670 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 CD70P32970 193 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 TSFMP43897 325 aaKnown RBP11.39□□□□□ -0.59
NEK9-210ENST00000557026 VASPP50552 380 aaPredicted RBP11.39□□□□□ -0.59
NEK9-210ENST00000557026 ZFP69Q49AA0 526 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 NKD1Q969G9 470 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 EMC9Q9Y3B6 208 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 SLC22A7Q9Y694 548 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 C4BP0C0L5 1744 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 EIF1AYO14602 144 aaKnown RBP11.39□□□□□ -0.59
NEK9-210ENST00000557026 AQP9O43315 295 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 RAC2P15153 192 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 LHCGRP22888 699 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 EIF1AXP47813 144 aaKnown RBP11.39□□□□□ -0.59
NEK9-210ENST00000557026 DBPQ10586 325 aaPredicted RBP11.39□□□□□ -0.59
NEK9-210ENST00000557026 GPR139Q6DWJ6 353 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 UBE2Q1Q7Z7E8 422 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 MCATQ8IVS2 390 aaKnown RBP11.39□□□□□ -0.59
NEK9-210ENST00000557026 FAM46BQ96A09 425 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 CNN2Q99439 309 aaKnown RBP11.39□□□□□ -0.59
NEK9-210ENST00000557026 CCM2LQ9NUG4 571 aaPredicted RBP11.39□□□□□ -0.59
NEK9-210ENST00000557026 ZNF175Q9Y473 711 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 TFECO14948 347 aaPredicted RBP11.39□□□□□ -0.59
NEK9-210ENST00000557026 SPARCP09486 303 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 POU2F1P14859 743 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 ACPPP15309 386 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 XRCC1P18887 633 aaPredicted RBP11.39□□□□□ -0.59
NEK9-210ENST00000557026 CCNOP22674 350 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 CD27P26842 260 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 EXT1Q16394 746 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 CHRFAM7AQ494W8 412 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 TMEM214Q6NUQ4 689 aaKnown RBP11.39□□□□□ -0.59
NEK9-210ENST00000557026 ZADH2Q8N4Q0 377 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 PROKR1Q8TCW9 393 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 RHBDF1Q96CC6 855 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 CDK15Q96Q40 435 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 HBEGFQ99075 208 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 XKR8Q9H6D3 395 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 GPN2Q9H9Y4 310 aaPredicted RBP11.39□□□□□ -0.59
NEK9-210ENST00000557026 AGPAT4Q9NRZ5 378 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 LOC105369274A0A096LPK9 316 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 J3QLW9 94 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 SURF4O15260 269 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 ZNF19P17023 458 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 CD40LGP29965 261 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 DCDC1P59894 354 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 RAB11FIP2Q7L804 512 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 OR4N4Q8N0Y3 316 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 CCDC71LQ8N9Z2 235 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 OR5M3Q8NGP4 307 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 SH3YL1Q96HL8 342 aaPredicted RBP11.39□□□□□ -0.59
NEK9-210ENST00000557026 SLC6A16Q9GZN6 736 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 IL17CQ9P0M4 197 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 KCNN3Q9UGI6 736 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms