RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 DCXRQ7Z4W1 244 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 BVESQ8NE79 360 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 JOSD2Q8TAC2 188 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 TWIST2Q8WVJ9 160 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 DNAJB3Q8WWF6 145 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 BRI3BPQ8WY22 251 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 LRRC58Q96CX6 371 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 F2RL3Q96RI0 385 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 ZNF382Q96SR6 550 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 MXRA8Q9BRK3 442 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 H2AFJQ9BTM1 129 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 PBDC1Q9BVG4 233 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 ZNF430Q9H8G1 570 aaPredicted RBP8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 CHODLQ9H9P2 273 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 HES2Q9Y543 173 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 NRCAMQ92823 1304 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 USP31Q70CQ4 1352 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 PMS2P1A4D2B8 440 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 ANKRD61A6NGH8 418 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 OPN1SWP03999 348 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 C5AR1P21730 350 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 FBLP22087 321 aaKnown RBP8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 IDH3GP51553 393 aaPredicted RBP8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 PCLAFQ15004 111 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 LETMD1Q6P1Q0 360 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 MAPK15Q8TD08 544 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 PTCHD1Q96NR3 888 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 SRRQ9GZT4 340 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 ZNF804BA4D1E1 1349 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 VNN1O95497 513 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 THP07101 528 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 S100A11P31949 105 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 S100A3P33764 101 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 LIPAP38571 399 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 ETV4P43268 484 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 CLCN7P51798 805 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 HTR4Q13639 388 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 SF3A2Q15428 464 aaKnown RBP8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 HSDL1Q3SXM5 330 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 ABRAQ8N0Z2 381 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 TRIM2Q9C040 744 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 EMC7Q9NPA0 242 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 DNAJC27Q9NZQ0 273 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 CHRNA9Q9UGM1 479 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 FBXL4Q9UKA2 621 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 M0QYT0 321 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 CREG1O75629 220 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 IGHEP01854 428 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 TNFSF4P23510 183 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 RFX5P48382 616 aaPredicted RBP8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 GSK3AP49840 483 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 GPR143P51810 404 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 KCNC3Q14003 757 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 CES5AQ6NT32 575 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 FAHD2BQ6P2I3 314 aaPredicted RBP8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 FAM83HQ6ZRV2 1179 aaPredicted RBP8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 FAHD2AQ96GK7 314 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 CCDC17Q96LX7 622 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 TXN2Q99757 166 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 CBLN4Q9NTU7 201 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 ENSAO43768 121 aaKnown RBP8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 UGDHO60701 494 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 TRAPPC6AO75865 159 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 TSPAN15O95858 294 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 IFNA21P01568 189 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 ACO1P21399 889 aaKnown RBP8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 FGF7P21781 194 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 NOS2P35228 1153 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 TAGLN2P37802 199 aaKnown RBP8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 COMPP49747 757 aaPredicted RBP8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 LRRC73Q5JTD7 316 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 FSTL4Q6MZW2 842 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 EFCAB12Q6NXP0 572 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 ZNF549Q6P9A3 640 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 C12orf40Q86WS4 652 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 POMGNT2Q8NAT1 580 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 NKD1Q969G9 470 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 MYOZ2Q9NPC6 264 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 SERINC1Q9NRX5 453 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 RBFOX1Q9NWB1 397 aaKnown RBP8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 C2orf42Q9NWW7 574 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 TAS2R16Q9NYV7 291 aa8.6□□□□□ -1.03
GTF2A1-203ENST00000553612 CHADO15335 359 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 TLR5O60602 858 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 VPS26AO75436 327 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 KLF8O95600 359 aaPredicted RBP8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 CFHP08603 1231 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 ACHEP22303 614 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 NOS3P29474 1203 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 CYP1B1Q16678 543 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 SAXO2Q658L1 398 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 COX15Q7KZN9 410 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 KCTD9Q7L273 389 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 PROKR2Q8NFJ6 384 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 OR2AP1Q8NGE2 309 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 GLRX2Q9NS18 164 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 TVP23BQ9NYZ1 205 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 RHCGQ9UBD6 479 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 CHD5Q8TDI0 1954 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 TMEM88BA6NKF7 163 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms