RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 A0A1W2PPR1 153 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 RPL37AP8A6NKH3 93 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 ERI2A8K979 691 aaKnown RBP3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 K7ERI5 159 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 MT-ND1P03886 318 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 FCGR3AP08637 254 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 HSD17B1P14061 328 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 MAPK3P27361 379 aaPredicted RBP3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 TMOD1P28289 359 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 ETV5P41161 510 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 NPY2RP49146 381 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 PRELPP51888 382 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 SLC7A2P52569 658 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 ATXN3P54252 364 aaPredicted RBP3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 MYBPC1Q00872 1141 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 ITPK1Q13572 414 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 PKN2Q16513 984 aaKnown RBP3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 TMEM44Q2T9K0 475 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 CCDC92Q53HC0 331 aaPredicted RBP3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 TCHHL1Q5QJ38 904 aaPredicted RBP3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 IL23RQ5VWK5 629 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 SEL1L3Q68CR1 1132 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 ARMCX5Q6P1M9 558 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 C1orf186Q6ZWK4 172 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 LUZP1Q86V48 1076 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 ELMOD2Q8IZ81 293 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 LYG1Q8N1E2 194 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 RELL2Q8NC24 303 aaPredicted RBP3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 CSNK1G2-AS1Q8NCQ2 148 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 C17orf47Q8NEP4 570 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 ANKRD9Q96BM1 317 aaPredicted RBP3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 RBM18Q96H35 190 aaKnown RBP3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 DEFB118Q96PH6 123 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 FAM111AQ96PZ2 611 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 ACCSQ96QU6 501 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 CCDC28BQ9BUN5 200 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 SIRPDQ9H106 197 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 C1orf21Q9H246 121 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 SPASTQ9UBP0 616 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 LHX3Q9UBR4 397 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 PIN4Q9Y237 131 aaKnown RBP3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 NUDCQ9Y266 331 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 ZNF175Q9Y473 711 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 NPC1L1Q9UHC9 1359 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 COL5A2P05997 1499 aaPredicted RBP3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 NPIPA5A0A0B4J1W7 369 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 A0A1B0GTH9 108 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 BICDL2A1A5D9 508 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 TMEM89A2RUT3 159 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 NPIPA5E9PKD4 350 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 EI24O14681 340 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 RASGRF2O14827 1237 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 BUB1O43683 1085 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 PRPSAP2O60256 369 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 GP9P14770 177 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 ARF4P18085 180 aaPredicted RBP3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 SHC1P29353 583 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 MAGEA4P43358 317 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 ASMTP46597 345 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 SLC6A8P48029 635 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 PGFP49763 221 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 SLC8A3P57103 927 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 LMO4P61968 165 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 IL1RL1Q01638 556 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 ANKRD55Q3KP44 614 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 UNC50Q53HI1 259 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 VWA2Q5GFL6 755 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 FAM159AQ6UWV7 190 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 ABRAXAS1Q6UWZ7 409 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 RBM43Q6ZSC3 357 aaKnown RBP3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 SLC25A42Q86VD7 318 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 RANBP3LQ86VV4 465 aaPredicted RBP3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 PYROXD2Q8N2H3 581 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 OR2L2Q8NH16 312 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 FAM222BQ8WU58 562 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 TOMM40LQ969M1 308 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 ADNPQ9H2P0 1102 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 RNF41Q9H4P4 317 aaPredicted RBP3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 IL1RL2Q9HB29 575 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 TAS2R16Q9NYV7 291 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 NINJ2Q9NZG7 142 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 BCAP29Q9UHQ4 241 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 ZNF346Q9UL40 294 aaKnown RBP3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 PLA2G4CQ9UP65 541 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 UBE4BO95155 1302 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 FAM205AQ6ZU69 1335 aa3.69□□□□□ -1.82
SMNDC1-205ENST00000477763 SYNJ2O15056 1496 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 A0A0A6YYD4 124 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 IGHV3-16A0A0C4DH30 117 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 ACOD1A6NK06 481 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 SHISA9B4DS77 424 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 CYB561D2O14569 222 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 PI15O43692 258 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 GALR3O60755 368 aaPredicted RBP3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 NUDT14O95848 222 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 HOXD4P09016 255 aaPredicted RBP3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 CCDC159P0C7I6 412 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 RALAP11233 206 aa3.68□□□□□ -1.82
SMNDC1-205ENST00000477763 HSPA1LP34931 641 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms