RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ABTB1Q969K4 478 aaPredicted RBP4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 WDR34Q96EX3 536 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 RBM18Q96H35 190 aaKnown RBP4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 MARK4Q96L34 752 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 TM9SF2Q99805 663 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 TUBA1CQ9BQE3 449 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 PIGQQ9BRB3 760 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 TMEM79Q9BSE2 394 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 TBCDQ9BTW9 1192 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 G6PC3Q9BUM1 346 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 ERVK-6Q9BXR3 956 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 ANGPTL4Q9BY76 406 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 GSX2Q9BZM3 304 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 ROGDIQ9GZN7 287 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 EHD1Q9H4M9 534 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 UBTD1Q9HAC8 227 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 TEX10Q9NXF1 929 aaPredicted RBP4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 GPRC5BQ9NZH0 403 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 CLCF1Q9UBD9 225 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 FETUBQ9UGM5 382 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 NDRG3Q9UGV2 375 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 ERVK-19Q9WJR5 959 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 SPACA6W5XKT8 324 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 DSCAMO60469 2012 aa4.67□□□□□ -1.66
SNRNP40-204ENST00000474025 RAI1Q7Z5J4 1906 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 MED12LQ86YW9 2145 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.66□□□□□ -1.665e-8■■■□□ 16
SNRNP40-204ENST00000474025 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 IQANK1A0A1B0GTG1 560 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 A0A1W2PNV4 684 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 NCF1BA6NI72 391 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 NCF1CA8MVU1 366 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 CAPN14A8MX76 684 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 H0Y3Z8 333 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 TP53I11O14683 189 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 TAPBPO15533 448 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 ICMTO60725 284 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 SH3BGRLO75368 114 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 PRKRAO75569 313 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 TNFSF13O75888 250 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 ACTL6AO96019 429 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 NCF1P14598 390 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 CPN1P15169 458 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 PAX1P15863 534 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 CPN2P22792 545 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 CRYGSP22914 178 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 LOXP28300 417 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 PTPN6P29350 595 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 GGT5P36269 586 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 CPOXP36551 454 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 MC3RP41968 323 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 CASP3P42574 277 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 CASP2P42575 452 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 SSR2P43308 183 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 PTH2RP49190 550 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 PCYT1AP49585 367 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 TMED10P49755 219 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 TNFRSF17Q02223 184 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 FAM27E3Q08E93 113 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 BIKQ13323 160 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 E2F2Q14209 437 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 CAPRIN1Q14444 709 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 ZNF267Q14586 743 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 TOMM20Q15388 145 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 OCLNQ16625 522 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 CYP1B1Q16678 543 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 AP5B1Q2VPB7 878 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 TMEM35AQ53FP2 167 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 FBXO48Q5FWF7 155 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 PAGE2BQ5JRK9 111 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 C18orf63Q68DL7 685 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 TIGD3Q6B0B8 471 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 C20orf204Q6ZNR8 217 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 FRA10AC1Q70Z53 315 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 YRDCQ86U90 279 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 PPIL6Q8IXY8 311 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 NKAPQ8N5F7 415 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 ZNF473Q8WTR7 871 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 ANKRD49Q8WVL7 239 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 TANKQ92844 425 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 RIT1Q92963 219 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 MAGOHBQ96A72 148 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 INTS12Q96CB8 462 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 CTHRC1Q96CG8 243 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 PTCD3Q96EY7 689 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 PIK3IP1Q96FE7 263 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 TMEM41AQ96HV5 264 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 VPS39Q96JC1 886 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 WFIKKN1Q96NZ8 548 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 NAT9Q9BTE0 207 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 MED18Q9BUE0 208 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 EFCAB11Q9BUY7 163 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 SORBS1Q9BX66 1292 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 CAPS2Q9BXY5 557 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 PIGMQ9H3S5 423 aa4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 RPF2Q9H7B2 306 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 CNOT10Q9H9A5 744 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 PPANQ9NQ55 473 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-204ENST00000474025 SNX15Q9NRS6 342 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms