RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 A6NL46 340 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 CLCA1A8K7I4 914 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 PP2D1A8MPX8 630 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 SERPINE3A8MV23 424 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 KLRC4-KLRK1H3BQV0 150 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 EEF2KO00418 725 aaKnown RBP4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 AQP7O14520 342 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ARPC5O15511 151 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 USP12O75317 370 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 SNNO75324 88 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 STX11O75558 287 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 POP7O75817 140 aaKnown RBP4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ZMPSTE24O75844 475 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 GSRP00390 522 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 MMP10P09238 476 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 PAEPP09466 180 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 OR52Z1P0C646 297 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 STAG3L1P0CL83 205 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ITGAMP11215 1152 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 RPA2P15927 270 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 OGNP20774 298 aaKnown RBP4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 AGXTP21549 392 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 CALML3P27482 149 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 MARCKSP29966 332 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 CA5AP35218 305 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 FRKP42685 505 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 RPL35P42766 123 aaKnown RBP4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 NAMPTP43490 491 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 HLCSP50747 726 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 CCR8P51685 355 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ZNF75DP51815 510 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 PRKXP51817 358 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 PER3P56645 1201 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 TMEM33P57088 247 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 MAGOHP61326 146 aaKnown RBP4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ST8SIA6P61647 398 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 RAB11AP62491 216 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ADAM8P78325 824 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 TXNL4AP83876 142 aaKnown RBP4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 FMO1Q01740 532 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 CDR2Q01850 454 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 SIGLEC14Q08ET2 396 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 MGAT3Q09327 533 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ITGADQ13349 1161 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 IL18R1Q13478 541 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ZNF169Q14929 603 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 C16orf72Q14CZ0 275 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 PDK3Q15120 406 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 RAB30Q15771 203 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 RAB11BQ15907 218 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 PSG3Q16557 428 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 RNF212Q495C1 297 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 TRIM60Q495X7 471 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ATP13A5Q4VNC0 1218 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 SLC35D3Q5M8T2 416 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ABHD17CQ6PCB6 329 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 TMEM65Q6PI78 240 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 BRAT1Q6PJG6 821 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 KLHL17Q6TDP4 642 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 TMEM108Q6UXF1 575 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 TFAP2EQ6VUC0 442 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 CYHR1Q6ZMK1 362 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 EIF3MQ7L2H7 374 aaKnown RBP4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 GDF7Q7Z4P5 450 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 CATSPERDQ86XM0 798 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ECHDC2Q86YB7 292 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 RBFAQ8N0V3 343 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 METTL4Q8N3J2 472 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 LRRC18Q8N456 261 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ZBTB2Q8N680 514 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 PQLC3Q8N755 202 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 NANOGP1Q8N7R0 232 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 L3MBTL4Q8NA19 623 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 GATSQ8NAP1 163 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 CCNYQ8ND76 341 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 OR10H4Q8NGA5 316 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 OR9K2Q8NGE7 335 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 NFKBIDQ8NI38 313 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 STOML3Q8TAV4 291 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 TBC1D16Q8TBP0 767 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ARNTL2Q8WYA1 636 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ST8SIA2Q92186 375 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 RRNAD1Q96FB5 475 aaKnown RBP4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 FBXL20Q96IG2 436 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 SIGLEC11Q96RL6 698 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 PCYT2Q99447 389 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 LGMNQ99538 433 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ELF4Q99607 663 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 MEIS3Q99687 375 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 NPAS1Q99742 590 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 NIPSNAP1Q9BPW8 284 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 CLSTN3Q9BQT9 956 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 C7orf50Q9BRJ6 194 aaKnown RBP4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 TMEM246Q9BRR3 403 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 FUZQ9BT04 418 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 TRMOQ9BU70 441 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 MED18Q9BUE0 208 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 DDA1Q9BW61 102 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 CPEB1Q9BZB8 566 aaKnown RBP4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 UCK2Q9BZX2 261 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms