RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 ZNF763Q0D2J5 394 aa18.75■□□□□ 0.59
GTF3A-202ENST00000419181 GTF3C1Q12789 2109 aa18.75■□□□□ 0.59
GTF3A-202ENST00000419181 MYO7BQ6PIF6 2116 aa18.75■□□□□ 0.59
GTF3A-202ENST00000419181 FAM111BQ6SJ93 734 aa18.75■□□□□ 0.59
GTF3A-202ENST00000419181 BNC2Q6ZN30 1099 aaPredicted RBP18.75■□□□□ 0.59
GTF3A-202ENST00000419181 RNF165Q6ZSG1 346 aa18.75■□□□□ 0.59
GTF3A-202ENST00000419181 CHERPQ8IWX8 916 aaKnown RBP18.75■□□□□ 0.59
GTF3A-202ENST00000419181 DND1Q8IYX4 353 aaKnown RBP18.75■□□□□ 0.59
GTF3A-202ENST00000419181 GHDCQ8N2G8 530 aa18.75■□□□□ 0.59
GTF3A-202ENST00000419181 FAM76AQ8TAV0 307 aa18.75■□□□□ 0.59
GTF3A-202ENST00000419181 TP53INP1Q96A56 240 aa18.75■□□□□ 0.59
GTF3A-202ENST00000419181 CTHRC1Q96CG8 243 aa18.75■□□□□ 0.59
GTF3A-202ENST00000419181 SH2D2AQ9NP31 389 aa18.75■□□□□ 0.59
GTF3A-202ENST00000419181 SACM1LQ9NTJ5 587 aa18.75■□□□□ 0.59
GTF3A-202ENST00000419181 EHD3Q9NZN3 535 aa18.75■□□□□ 0.59
GTF3A-202ENST00000419181 ZNF639Q9UID6 485 aa18.75■□□□□ 0.59
GTF3A-202ENST00000419181 ZNF835Q9Y2P0 537 aa18.75■□□□□ 0.59
GTF3A-202ENST00000419181 CHRNGP07510 517 aa18.74■□□□□ 0.59
GTF3A-202ENST00000419181 CNR1P21554 472 aa18.74■□□□□ 0.59
GTF3A-202ENST00000419181 PRPH2P23942 346 aa18.74■□□□□ 0.59
GTF3A-202ENST00000419181 CA7P43166 264 aa18.74■□□□□ 0.59
GTF3A-202ENST00000419181 PER3P56645 1201 aa18.74■□□□□ 0.59
GTF3A-202ENST00000419181 KANK2Q63ZY3 851 aa18.74■□□□□ 0.59
GTF3A-202ENST00000419181 FJX1Q86VR8 437 aa18.74■□□□□ 0.59
GTF3A-202ENST00000419181 C17orf47Q8NEP4 570 aa18.74■□□□□ 0.59
GTF3A-202ENST00000419181 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.74■□□□□ 0.591e-8■□□□□ 11.1
GTF3A-202ENST00000419181 ADIPOR1Q96A54 375 aa18.74■□□□□ 0.59
GTF3A-202ENST00000419181 METTL2AQ96IZ6 378 aaKnown RBP18.74■□□□□ 0.59
GTF3A-202ENST00000419181 FAM173AQ9BQD7 235 aa18.74■□□□□ 0.59
GTF3A-202ENST00000419181 BRINP2Q9C0B6 783 aa18.74■□□□□ 0.59
GTF3A-202ENST00000419181 PTGDR2Q9Y5Y4 395 aa18.74■□□□□ 0.59
GTF3A-202ENST00000419181 EXPH5Q8NEV8 1989 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 TRGV8A0A0C4DH27 118 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 G3V3Y1 287 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 RGS16O15492 202 aaPredicted RBP18.73■□□□□ 0.59
GTF3A-202ENST00000419181 HS6ST1O60243 411 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 DDCP20711 480 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 ETV4P43268 484 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 NR0B1P51843 470 aaKnown RBP18.73■□□□□ 0.59
GTF3A-202ENST00000419181 HSF1Q00613 529 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 DUSP8Q13202 625 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 KIAA0040Q15053 153 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 LTB4RQ15722 352 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 CEBPEQ15744 281 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 CMPK2Q5EBM0 449 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 ARL13AQ5H913 290 aaPredicted RBP18.73■□□□□ 0.59
GTF3A-202ENST00000419181 HLA-DQA1Q5Y7H0 255 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 Q6ZPB1 254 aaPredicted RBP18.73■□□□□ 0.59
GTF3A-202ENST00000419181 GK5Q6ZS86 529 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 SAMD14Q8IZD0 417 aaPredicted RBP18.73■□□□□ 0.59
GTF3A-202ENST00000419181 TAGAPQ8N103 731 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 ADCY4Q8NFM4 1077 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 ZNF675Q8TD23 568 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 PAQR8Q8TEZ7 354 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 EXOSC8Q96B26 276 aaKnown RBP18.73■□□□□ 0.59
GTF3A-202ENST00000419181 MAGED4Q96JG8 741 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 TUBB1Q9H4B7 451 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 MYNNQ9NPC7 610 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 DTX4Q9Y2E6 619 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 POLR3HQ9Y535 204 aaPredicted RBP18.73■□□□□ 0.59
GTF3A-202ENST00000419181 DNAJC15Q9Y5T4 150 aa18.73■□□□□ 0.59
GTF3A-202ENST00000419181 CHCHD2Q9Y6H1 151 aaPredicted RBP18.73■□□□□ 0.59
GTF3A-202ENST00000419181 ZNF407Q9C0G0 2248 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 SLC28A1O00337 649 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 GLSO94925 669 aaPredicted RBP18.72■□□□□ 0.59
GTF3A-202ENST00000419181 CBX7O95931 251 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 P04436 131 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 FGF4P08620 206 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 GPX3P22352 226 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 FOXO1Q12778 655 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 EXOSC7Q15024 291 aaKnown RBP18.72■□□□□ 0.59
GTF3A-202ENST00000419181 NTRK2Q16620 822 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 TRMT12Q53H54 448 aaKnown RBP18.72■□□□□ 0.59
GTF3A-202ENST00000419181 SLC22A10Q63ZE4 541 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 HIST2H2BCQ6DN03 193 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 NOXRED1Q6NXP6 359 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 ZCCHC23Q6ZST2 131 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 FAM47EQ6ZV65 393 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 FGD2Q7Z6J4 655 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 SPPL2CQ8IUH8 684 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 CCDC116Q8IYX3 515 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 SIMC1Q8NDZ2 872 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 OR2T11Q8NH01 316 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 TTTY12Q9BZ98 90 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 SLC35C2Q9NQQ7 365 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 CFL2Q9Y281 166 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 WBP11Q9Y2W2 641 aaKnown RBP18.72■□□□□ 0.59
GTF3A-202ENST00000419181 FIS1Q9Y3D6 152 aa18.72■□□□□ 0.59
GTF3A-202ENST00000419181 TMEM233B4DJY2 109 aa18.71■□□□□ 0.59
GTF3A-202ENST00000419181 RGS14O43566 566 aa18.71■□□□□ 0.59
GTF3A-202ENST00000419181 ZG16O60844 167 aa18.71■□□□□ 0.59
GTF3A-202ENST00000419181 SEC22BO75396 215 aa18.71■□□□□ 0.59
GTF3A-202ENST00000419181 CHEK2O96017 543 aa18.71■□□□□ 0.59
GTF3A-202ENST00000419181 BPGMP07738 259 aa18.71■□□□□ 0.59
GTF3A-202ENST00000419181 NEFHP12036 1026 aa18.71■□□□□ 0.59
GTF3A-202ENST00000419181 PCSK2P16519 638 aa18.71■□□□□ 0.59
GTF3A-202ENST00000419181 ARRB2P32121 409 aa18.71■□□□□ 0.59
GTF3A-202ENST00000419181 SERPINB5P36952 375 aa18.71■□□□□ 0.59
GTF3A-202ENST00000419181 DNASE1L1P49184 302 aa18.71■□□□□ 0.59
GTF3A-202ENST00000419181 MRPS35P82673 323 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms